Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq2 271 7e-68
>seq2
Length=2234776
Score = 271 bits (300), Expect = 7e-68
Identities = 598/889 (67%), Gaps = 17/889 (2%)
Strand=Plus/Minus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
|||||||| ||| |||||| ||||| || || ||||||||||| ||| || ||||||
Sbjct 2161570 TTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGCCAAAGAGATATTT 2161511
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAAT 13488
||||| || || |||||||| | || | | || || | || | | | | |
Sbjct 2161510 TCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTTGCCCAAAGCAAGAAGT 2161451
Query 13489 AATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGT 13548
|||||||| |||| ||| |||| ||| ||| |||| | | || |||||||||| ||
Sbjct 2161450 AATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCAGTTCATACCTAATAAA 2161391
Query 13549 TTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATA 13608
||||| | || || || | | ||||| || ||||| || | || ||
Sbjct 2161390 GAGACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGACAGCTTCAGTAATGATC 2161331
Query 13609 ATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 13668
| | || ||| || ||| | || | ||| || | || || |||||
Sbjct 2161330 TTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAATGAGAGAATAACAAGCAAGCAAAG 2161271
Query 13669 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 13728
||| ||| | || |||||||| | || | |||||| || ||||| | || |||||
Sbjct 2161270 TCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGTGAGACCAGGCATT 2161211
Query 13729 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 13788
|| |||| || || | ||| || || | ||| || || || || ||||| || || |||
Sbjct 2161210 AAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGAAGAAAATACCTTCA 2161151
Query 13789 ACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCCATT 13846
|| |||||||| || | || || ||| |||||| |||||| | || ||||| ||||
Sbjct 2161150 ACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTTCATCGTCATTGAT--CCATC 2161093
Query 13847 TTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAAT 13906
| ||||||||||| |||| ||| || | || |||| || |||||||||||||
Sbjct 2161092 GTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCAATAGCATTGAATAAAT 2161033
Query 13907 GTTC--CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 13964
|| |||| || || |||| || || |||||||| |||||| || |||||||
Sbjct 2161032 AATCTGCTTCCTTTGTGTCCTTG--ATATAAGTATCAATCAGTAAGGAGTAAGTTTCAGA 2160975
Query 13965 GTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14024
||| |||||||| || || || |||||||| || || | ||||| | ||| ||
Sbjct 2160974 GTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGGCTTCAGGAAGTTGAAC 2160915
Query 14025 CTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAA 14084
|| | | || ||||| | || ||||||||||||||||||||| || ||||| ||
Sbjct 2160914 TTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAA 2160855
Query 14085 TGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG---TTGA---GTTTTTTCCAATC 14138
|| || | || |||||| || || ||||||| || | | |||| ||||||
Sbjct 2160854 AGCTAAGACTCTTGAAATAAAAAAT--CT-TTCATTGTCATTCAAACGGTTTTCCCAATC 2160798
Query 14139 GGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTT 14198
| |||||| | || | || || | ||||| || ||| ||||||| ||
Sbjct 2160797 ATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAGCTTCAGCTTTCTT 2160738
Query 14199 ATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14247
||||||| ||| ||||| | |||| || || |||| |||||||||
Sbjct 2160737 ATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAATCTT 2160689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588710264600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |