Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5 495 5e-135 seq2 239 6e-58 >seq5 Length=1485630 Score = 495 bits (548), Expect = 5e-135 Identities = 1383/2105 (66%), Gaps = 47/2105 (2%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 ||||||||||| | | | ||| |||| || | | ||||||||| || || || ||| Sbjct 767630 GTAAACTGAATAGCTGCTGCTGCTGCTTGAGTTCTCAAATAGTACATACCAGTCTTAAGA 767571 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAG-TTTGGAATAGCTAGGATCGGCTAT 70919 || |||| ||||| ||||||||| || || ||| || | | || || || Sbjct 767570 CCCTTTTTCCAACCGTAGAAATGCATAGCAGTAAGCTTTTTCATGGTT-GGTTCTCTAAT 767512 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 || |||||||| ||||| |||||| ||||| | || ||||| |||||||| | || Sbjct 767511 GTAGATATTCATTGACTGTGATTGATCAATGAATGGACCTCTGTCAGCAGCCATATCAAT 767452 Query 70980 GATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 || | |||| || | | |||||| ||||||| || | | ||| | || | ||||| Sbjct 767451 AAT-GACTTTCTGAGATAATTCCCATGTAGTTTTGTACAATTCCTTCAATTCCTTTGGAA 767393 Query 71039 GGTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCAT 71095 ||||||| || ||||| || ||| ||| || |||||| | || || || |||| Sbjct 767392 TGTTTGTAATATTTTGAATAGAGCCATTATCAGCGATAATCTTGTTCTTCATAGAATCAT 767333 Query 71096 TCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGAGGATTAACTACTTGAAAT 71151 ||| ||| | | | || | || |||| | |||||||| | ||||||| Sbjct 767332 CCCA-AATGCCCAAT---TCAACAAGGTCCTTAAGTAACCATGGATTAACAATTTGAAAT 767277 Query 71152 TCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTA 71211 || |||| ||| ||||| | || ||| |||||| ||||| ||||| | | ||||| Sbjct 767276 TCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGGTTCGAAACATTCATTG 767217 Query 71212 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTA 71271 || | |||||||| ||| |||||||| |||||||| || || || ||| |||||| Sbjct 767216 AAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACTAAAAGAGAGTTTCTA 767157 Query 71272 AGACCATGTGATCGGATTTTATCTTTT-AGAGATTCCCAATTCCAAAGATCCGATGGTAC 71330 | ||||| | | | || ||| || | ||| ||||||| ||| | ||| | |||| Sbjct 767156 ATTCCATGCT-TAGCAACTTGTCTCTTCAAAGAATCCCAATCCCATAAATCAGTTGGTTT 767098 Query 71331 AACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATC 71390 || || ||| ||| ||| | ||| || | Sbjct 767097 AATACCCCAAAGATCAAATTGTAATTGACCCTTAGCAGCTGGCGATGTTTTATAAGTTTG 767038 Query 71391 GTATGGTCCTTCTTTTTCGGCTAGTTCACAACTC--GCCTCTAATGCTCCATAATAAATG 71448 || |||||||| ||| ||| | ||| ||| || || | ||| ||| ||||| Sbjct 767037 ATAAGGTCCTTCAATTTTGGCCAAGTCA--ACTGAGGCTTCAACTGCAGCATGGTAAATA 766980 Query 71449 GTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAG 71508 ||||| || |||| |||| | | || ||||| || ||||||||| | |||| Sbjct 766979 GTTTCAAAGATCTGGATATTCAATTGTTTAGCTTCAGGTGAATCAAATGGCAATCTTAAT 766920 Query 71509 AGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTA 71568 ||||| || || | | ||||| || |||||| | ||||| || | |||||| || Sbjct 766919 GCCATAAAGGCATCAGAAAGACCTTGGACACCAATAGCAATAGGCCTATTTCTCTTGTTG 766860 Query 71569 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 71628 || | || || |||| |||||||||||| |||| || ||||| || | ||| Sbjct 766859 GAGTACTTGGCCTCAGGAACAGGATAATAATTTCTATCAATGATTTTGTTCAAATTATGA 766800 Query 71629 ACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCAT-----CTATTA 71683 || | || || || || | || ||| |||||| | | || | |||| | Sbjct 766799 ACCAAGACCTTAGTGACTTCATGTAATTTCTCAAAATCGTACCAACCCTTCTTACTATCA 766740 Query 71684 CAA-----ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 71736 | | | | || || |||| ||| |||| |||||| || || || |||| || | Sbjct 766739 CCAGTAACAAAAGTAGGTAAAGCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGGA 766680 Query 71737 TCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGT 71796 | |||| | ||||||| ||| | |||||| | |||||| || | ||| | | Sbjct 766679 GAAGAGTATTCAACAATTTCACAGCATAAATTACTTGATTTGATGACACCAAGATTCTTT 766620 Query 71797 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATC 71856 ||||| ||| | ||||| || ||||||||||| || || || |||||||||| | Sbjct 766619 TGATTGGACTTCTCATTACAAGCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGTT 766560 Query 71857 TGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT- 71915 |||| ||| | ||| | | ||| | | |||| || | | | |||| | ||||| Sbjct 766559 TGAGCTTCCAAAATAGAGTACCAAAGTTTTTGAGCTTTCACTGT--TCTTACAGCTCTTC 766502 Query 71916 -TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATC 71974 ||| | ||| ||| | ||| || ||| || || | || || || ||| | Sbjct 766501 CTTCACGTTCATATCTTTCATACAAAGCTTCAAATTCTTTACCGTAACAATCAGATAAAC 766442 Query 71975 CAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAA 72034 | ||| |||||| || | | || ||||| || || || | | |||| ||||||| Sbjct 766441 CTGGAGCTTCATTAGGTGAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTTCATAA 766382 Query 72035 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 72094 | | |||| |||||| | || | ||||| |||||||| ||| || || ||||| Sbjct 766381 ATAAATCACTAATCCATAAGGCAACAAATAAATCTCTGGCTCTGATTTCTTCTTTTCCGT 766322 Query 72095 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 72154 ||||||| | | || | ||| | | ||||||| |||||| ||||| ||||||| | Sbjct 766321 GATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAAG 766262 Query 72155 CCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 72214 | | | | || || ||||| || || || || || | |||||||| ||||| || ||| Sbjct 766261 CGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAAA 766202 Query 72215 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 72274 | | || ||| || ||||||||||| |||| || || || || | ||||| ||| Sbjct 766201 CACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCAG 766142 Query 72275 TGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334 | | | |||||| || || ||| || || || || | || || || ||||| | Sbjct 766141 TTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCAC 766082 Query 72335 ATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 72393 || ||||||| ||||| || ||||| || || ||| ||| ||||| || | ||| Sbjct 766081 AT-GTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAAA 766023 Query 72394 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 72453 || ||||||||| | || || || |||||||| || ||||| || || || || Sbjct 766022 CAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGTG 765963 Query 72454 AACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--AT 72511 || | || ||||| | ||| || || | ||| | ||| | || ||| | || Sbjct 765962 AAATACTTCAAAGACATCAAATTATAAGTTTTGATAAC--ATTATCAATGTCATCGCCAT 765905 Query 72512 GTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTA 72571 | || || || || || | ||| | ||| ||||| ||||||||| ||| ||| || || Sbjct 765904 GAATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCCATCTA 765845 Query 72572 TTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTC 72629 | | || || || ||| || || ||||| |||||||| || || || ||||| || Sbjct 765844 CTCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATTATAGTTGAAA--TC 765787 Query 72630 TCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGT 72689 ||||| |||| |||| ||||||| | || || | || | | || || || || Sbjct 765786 GCGTTCATAAACAATAGCCGAATTCAATTCTTCTTCATGTCTTGCAATAATGTCATAAGT 765727 Query 72690 GATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 72749 |||| || || ||||||||||| | || |||| |||| || | ||||| | Sbjct 765726 CTCCTTTGAGATCATAGGAGAATGTTTTCTCGTTCTAGGGTTAATGTATTCATATAAAAC 765667 Query 72750 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 72809 || ||| |||| | ||| |||| | |||| || || |||||||| || || ||||| Sbjct 765666 CTTCATGACTTGAGAGAATTGTTTGATGGTTTGTTTATGGAGATTTGAAACAGCAATTCT 765607 Query 72810 GGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGC 72869 || || | ||| |||||||| ||||| ||||| | ||| || ||||| || || Sbjct 765606 AGCAGCCAAAATAGCATAATCAGGATGAATAGTAGTCATATAGGCAGCAATTTCAGCCGC 765547 Query 72870 CAGAG 72874 | ||| Sbjct 765546 CTGAG 765542 >seq2 Length=2234776 Score = 239 bits (264), Expect = 6e-58 Identities = 608/916 (66%), Gaps = 38/916 (4%) Strand=Plus/Minus Query 41758 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCC 41817 || |||||| || ||||| || ||| || | |||||||| |||||||| || || Sbjct 2161586 AGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACC 2161527 Query 41818 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 41877 |||| || |||||||||||||| ||||| ||||||| | || |||| || || Sbjct 2161526 AGCCAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTT 2161467 Query 41878 TCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACA 41937 ||||| || || ||||||||||| | ||||| | ||| ||| | | || Sbjct 2161466 GCCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCA 2161407 Query 41938 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGA 41996 ||||| |||| | || || | ||| | || ||| | ||| ||| || || Sbjct 2161406 GTTCATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTT-TTCGATTTCGA 2161348 Query 41997 CCGCGTCTGTTATAATAGATCTT----ACTGTTTCT---TCAC-TCGGTGGATACAATAA 42048 | || || || || |||||| || | | ||| || || | | ||| | Sbjct 2161347 CAGCTTCAGTAAT----GATCTTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAATGA 2161292 Query 42049 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTC 42108 | ||| ||| || || || || || | ||| |||||||| | || ||||| Sbjct 2161291 GAGAATAA----CAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTC 2161236 Query 42109 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAA 42168 ||| || || ||||| || ||||||| || | ||| || ||||| || ||||| ||||| Sbjct 2161235 GTTAGAGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAA 2161176 Query 42169 TGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC- 42227 || || || ||||| || ||||| || || |||||||||| | ||| || ||| ||| Sbjct 2161175 CGAGCCCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCA-AACA 2161117 Query 42228 ---CGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 42284 | || ||||| ||||| | |||||| || ||||| | ||| | || || | Sbjct 2161116 ATGCTTCATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAA 2161057 Query 42285 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGA 42344 | |||| || ||||| || | ||| | | ||| || | || || | ||| ||||| | Sbjct 2161056 TGTTTTCAATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAA 2160997 Query 42345 TCA--AAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 42402 ||| || || || |||| || || |||||||| || || || || || ||||| Sbjct 2160996 TCAGTAAGGAGTAAG--TTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAA 2160939 Query 42403 ACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCAC 42462 || |||| || | || || ||||| | | || ||| |||||||||| || || Sbjct 2160938 GCACTTGGCTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAAC 2160879 Query 42463 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGG 42522 || || ||| || ||||| || || || || | |||||| || |||| | Sbjct 2160878 AATACCATCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCAT---- 2160823 Query 42523 TGTTAAT-------TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCG 42575 ||| | | || | |||||||| | ||| || || || | |||||| | | Sbjct 2160822 TGTCATTCAAACGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAG 2160763 Query 42576 TCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGA 42635 |||| || || ||||| || || |||||||| | |||||| |||||||||| |||||||| Sbjct 2160762 TCCAGAAGGAAGCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGA 2160703 Query 42636 AAATAACAAATCTATT 42651 ||| ||||||||| || Sbjct 2160702 AAAGAACAAATCTTTT 2160687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139074161400