Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq2 149 9e-31
>seq2
Length=2234776
Score = 149 bits (164), Expect = 9e-31
Identities = 392/591 (66%), Gaps = 8/591 (1%)
Strand=Plus/Plus
Query 124986 AGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAG 125045
|||||| || || || || | |||||||| || ||| ||||||| || || ||| |
Sbjct 2160690 AGATTTGTTCTTTTCCCAATTAAATATCATGAAATCTGGCAAATGTATAAGAAAGCTGAA 2160749
Query 125046 GCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACT 125105
|| ||||| ||||| | |||||| | || | ||||| | | |||||||| |
Sbjct 2160750 GCTTCCTTCTGGACTGCAGAAGAGATTGACTTAGGAAAGGATGTTCATGATTGGGAAAAC 2160809
Query 125106 CGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCC 125165
||||||| ||| | ||| || ||||| || | || || |||||||| | ||
Sbjct 2160810 CGTTTGAATGACAATGAAAGATTTTTTATTTCAAGAGTCTTAGCTTTCTTTGCTGCATCT 2160869
Query 125166 GATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGA-GTTGACCATTCCAG 125223
||||| || || || || ||| | || || | ||||| || ||| | | |||| |
Sbjct 2160870 GATGGTATTGTTAATGAAAATTTAGTAGAAAAC-TTCTCAGCTGAAGTTCAAC-TTCCTG 2160927
Query 125224 AGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACT 125283
| | |||||| || || |||||||||||||| || ||| | ||||| |||| ||||
Sbjct 2160928 AAGCCAAGTGCTTCTATGGTTTCCAAATCATGATGGAAAACATCCACTCTGAAACTTACT 2160987
Query 125284 CTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAACACAT--GCTCTTTAACGC 125341
| ||||||||| | || || || | ||| | || || || | || || ||
Sbjct 2160988 CCTTACTGATTGATACTTATATCAAGGA--CACAAAGGAAGCAGATTATTTATTCAATGC 2161045
Query 125342 AATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGA 125401
|| || | | || | || |||||||| |||||| | || |||||| ||||
Sbjct 2161046 TATTGAAAACATTCCATGCATCAAACAAAAGGCTGAATGGGCTTTACGATGGATCAATGA 2161105
Query 125402 CGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTT 125461
||| | | | || | || ||| | || || || || || || || || || |||||
Sbjct 2161106 CGATGAAGCATTGTTTGGTGAAAGATTAGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTT 2161165
Query 125462 TTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGAC 125521
||||| ||||| | ||||| |||||||||||| | || | ||||| || || ||
Sbjct 2161166 CTCGGGCTCGTTTGCTTCTATCTTCTGGCTCAAGAAGAGAGGTTTAATGCCTGGTCTCAC 2161225
Query 125522 GCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572
| |||||| || || | |||| || || |||| |||||||||
Sbjct 2161226 ATTCTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACTGACTTTGC 2161276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059061051400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |