Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq9 136 6e-28
seq3 122 1e-23
>seq9
Length=942090
Score = 136 bits (150), Expect = 6e-28
Identities = 194/271 (72%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| || | ||| |||||| |||||||||||||| ||||| || || |||||
Sbjct 357705 GCTAAGCGTCACCGAAAGAT-TCTTCGTGATAACATCCAAGGTATCACTAAACCTGCTAT 357647
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | || | | ||||| || |||||| |||||| ||| |||| ||||| |
Sbjct 357646 CAGAAGATTAGCAAGAAGAGGTGGTGTTAAGCGTATCTCTGCTTTGATCTACGAAGAAGT 357587
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | | |||||||||| ||| | | | ||||| |||||| || |||||||||
Sbjct 357586 TAGAGGTGTTTTGAAGTCTTTCTTGGAATCAGTTATAAGAGATGCTGTCACCTATACCGA 357527
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| ||||| | |||||||| || || | ||| | |||||||| | || | |||||
Sbjct 357526 ACATGCTAAGAGAAAGACTGTTACATCATTAGATGTTGTCTATGCTCTTAAGAGACAAGG 357467
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| | |||| ||||| || ||||| ||
Sbjct 357466 AAGAACCCTTTAYGGTTTCGGTGGTTAAACT 357436
>seq3
Length=2048561
Score = 122 bits (134), Expect = 1e-23
Identities = 162/224 (72%), Gaps = 1/224 (0%)
Strand=Plus/Minus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
|||| |||||| |||||||| ||||| || |||||||| |||||| | | |||| |
Sbjct 357358 AGAT-TCTTCGTGATAACATTCAAGGTATTACCAAGCCTGCTATCAGAAGATTGGCGAGA 357300
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| ||||| ||| |||| | ||| |||| ||||| | | | ||| | |||
Sbjct 357299 AGAGGTGGTGTCAAACGTATCTCAGCTTTGATCTACGAAGAAGTCAGAGGCGTTCTTAAG 357240
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
||| | | ||||||| | ||||||| | ||||| || |||||||| | |||
Sbjct 357239 TCATTCTTAGAATCCGTTATTCGTGATGCTGTTACTTATACTGAACACGCTAAGAGAAAG 357180
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| || ||||| | |||||||| ||||| | |||||
Sbjct 357179 ACTGTCACTTCATTGGATGTTGTCTATGCTTTGAAGAGACAAGG 357136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075186285395
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |