Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq2 224 1e-53
>seq2
Length=2234776
Score = 224 bits (248), Expect = 1e-53
Identities = 582/889 (65%), Gaps = 9/889 (1%)
Strand=Plus/Minus
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244
|||||||||||| |||||| |||||||| ||||| || || || |||| || ||| |
Sbjct 2161570 TTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGCCAAAGAGATATTT 2161511
Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304
||||| || ||||||||||| ||| || | | || || |||| | | |
Sbjct 2161510 TCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTTGCCCAAAGCAAGAAGT 2161451
Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364
||||||||||| |||||||| | ||| |||||||| | | || |||||||| | ||
Sbjct 2161450 AATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCAGTTCATACCTAATAAA 2161391
Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424
||||| | ||| | || || | ||||| || ||| |||||| ||| ||
Sbjct 2161390 GAGACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGACAGCTTCAGTAATGATC 2161331
Query 21425 TTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAA 21484
||| | || | ||| | || || || | ||| || |||||
Sbjct 2161330 TTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAATGAGAGAATAACAAGCAAGCAAAG 2161271
Query 21485 TCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATT 21544
||| ||| ||||||||||| || | || ||||| ||||| ||||| | ||| ||||||
Sbjct 2161270 TCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGTGAGACCAGGCATT 2161211
Query 21545 AATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCA 21604
|| |||||||| || | ||| || || || ||||| | || || |||||||| || |||
Sbjct 2161210 AAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGAAGAAAATACCTTCA 2161151
Query 21605 ACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC--CAAT-ATCCAT 21661
|| |||||||| |||||||||| |||||| | || ||| ||| || | ||||||
Sbjct 2161150 ACAGCAGCAAAGGCAACTAATCTTTCACCAAA---CAATGCTTCATCGTCATTGATCCAT 2161094
Query 21662 TTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGA 21721
| ||||||| ||||||| ||| || || ||| | |||||||| || || | |
Sbjct 2161093 CGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCAATAGCATTGAATAAA 2161034
Query 21722 TGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAA 21781
| || | ||| | | || | || || |||||||
Sbjct 2161033 TAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAGTAAGGAGTAAGTTTCAGAG 2160974
Query 21782 TGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACC 21841
|| || ||||| ||| || || || || || || || | || || | | ||||||
Sbjct 2160973 TGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGGCTTCAGGAAGTTGAACT 2160914
Query 21842 TCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAAT 21901
|| | | || || | || |||||||| || || |||||| || ||||| ||
Sbjct 2160913 TCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAAA 2160854
Query 21902 GCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAA---TTTTTTCCAATCTAAT 21958
|| || | || |||||| ||| ||| || || | || |||| ||||||
Sbjct 2160853 GCTAAGACTCTTGAAATAAAAAATCTTTCATTGTCATTCAAACGGTTTTCCCAATCATGA 2160794
Query 21959 AAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATAC 22018
| ||| ||| ||| || | ||||| | ||||| ||| ||| ||| || ||||||
Sbjct 2160793 ACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAGCTTCAGCTTTCTTATAC 2160734
Query 22019 ATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCTGTTAT 22067
|| |||||| |||| |||| | ||||| || | ||||| || ||||
Sbjct 2160733 ATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAATCTTTTAT 2160685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900700268600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |