Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq5 471 5e-128 seq2 214 2e-50 >seq5 Length=1485630 Score = 471 bits (522), Expect = 5e-128 Identities = 1378/2104 (65%), Gaps = 45/2104 (2%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 || || ||||| | || | ||| | || || | | ||||||||| || || || ||| Sbjct 767630 GTAAACTGAATAGCTGCTGCTGCTGCTTGAGTTCTCAAATAGTACATACCAGTCTTAAGA 767571 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAG-TTTGGAATAACTCGGATCTGCTAT 62113 || |||| ||||| ||||||||| || || ||| || | || ||| || Sbjct 767570 CCCTTTTTCCAACCGTAGAAATGCATAGCAGTAAGCTTTTTCATGGTT-GGTTCTCTAAT 767512 Query 62114 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62173 | ||||||||| || || |||||| ||||| | || ||||| |||||||| | || Sbjct 767511 GTAGATATTCATTGACTGTGATTGATCAATGAATGGACCTCTGTCAGCAGCCATATCAAT 767452 Query 62174 GATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 || | |||| || | | |||||| ||||||| || | | ||| | || | ||||| Sbjct 767451 AAT-GACTTTCTGAGATAATTCCCATGTAGTTTTGTACAATTCCTTCAATTCCTTTGGAA 767393 Query 62233 GGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62289 ||||||| || ||||| || ||| ||| || |||||| | ||||| || ||||| Sbjct 767392 TGTTTGTAATATTTTGAATAGAGCCATTATCAGCGATAATCTTGTTCTTCATAGAATCAT 767333 Query 62290 TCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAACTACTTGAAAT 62345 ||| ||| | | | || | || |||| | |||||||| | ||||||| Sbjct 767332 CCCA-AATGCCCAAT---TCAACAAGGTCCTTAAGTAACCATGGATTAACAATTTGAAAT 767277 Query 62346 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTA 62405 || |||| ||| ||||| | || ||| |||||| ||||| ||||| | | ||||| Sbjct 767276 TCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGGTTCGAAACATTCATTG 767217 Query 62406 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62465 || | |||||||| ||| |||||||| |||||||| || || || | | |||||| Sbjct 767216 AAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACTAAAAGAGAGTTTCTA 767157 Query 62466 AGACCGTATGTTCTG-ATTTTATCTTTT-AGAGGTTCCCAATTCCAAAGATCCGACGGTA 62523 | || ||| | | | || ||| || | || ||||||| ||| | ||| | ||| Sbjct 767156 ATTCC--ATGCTTAGCAACTTGTCTCTTCAAAGAATCCCAATCCCATAAATCAGTTGGTT 767099 Query 62524 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62583 || ||||| ||| ||| || |||| | ||| || | Sbjct 767098 TAATACCCCAAAGATCAAATTGTAATTGACCCTTAGCAGCTGGCGATGTTTTATAAGTTT 767039 Query 62584 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAAT 62641 || |||||||| | | || | ||| ||| || || | |||| | | ||||| Sbjct 767038 GATAAGGTCCTTCAATTTTGGCCAAGTCA--ACTGAGGCTTCAACTGCAGCATGGTAAAT 766981 Query 62642 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAA 62701 ||||| ||||||| |||| | | || ||||| | ||||||||| | |||| Sbjct 766980 AGTTTCAAAGATCTGGATATTCAATTGTTTAGCTTCAGGTGAATCAAATGGCAATCTTAA 766921 Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761 ||||| || || | | ||||| ||||||||| | ||||| |||| |||||| || Sbjct 766920 TGCCATAAAGGCATCAGAAAGACCTTGGACACCAATAGCAATAGGCCTATTTCTCTTGTT 766861 Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62821 ||| | || || |||| |||||||||||| |||| || ||||| || | ||| Sbjct 766860 GGAGTACTTGGCCTCAGGAACAGGATAATAATTTCTATCAATGATTTTGTTCAAATTATG 766801 Query 62822 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCAT-----CTATT 62876 || | || || || || | | ||| |||||| | | || | |||| Sbjct 766800 AACCAAGACCTTAGTGACTTCATGTAATTTCTCAAAATCGTACCAACCCTTCTTACTATC 766741 Query 62877 ACAA-----ACATGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 62929 || | | | || || |||| ||| |||| |||||| || || || |||| || Sbjct 766740 ACCAGTAACAAAAGTAGGTAAAGCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGG 766681 Query 62930 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTG 62989 | | |||| | || ||| ||| | |||||| | ||||| || | ||| | Sbjct 766680 AGAAGAGTATTCAACAATTTCACAGCATAAATTACTTGATTTGATGACACCAAGATTCTT 766621 Query 62990 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 63049 |||||| ||| | ||||| || ||||||||||| |||||||| |||||||||| | Sbjct 766620 TTGATTGGACTTCTCATTACAAGCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGT 766561 Query 63050 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCT 63109 |||| ||| | ||| | | ||| | | |||| || | | | | ||| | Sbjct 766560 TTGAGCTTCCAAAATAGAGTACCAAAGTTTTTGAGCTTTCACTGTTCTTACAGCTCTTCC 766501 Query 63110 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCC 63169 ||| | ||| ||| | |||||| ||| || || | || || || || || Sbjct 766500 TTCACGTTCATATCTTTCATACAAAGCTTCAAATTCTTTACCGTAACAATCAGATAAACC 766441 Query 63170 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63229 ||| ||||| || | | || ||||| || ||| || ||| |||| |||||||| Sbjct 766440 TGGAGCTTCATTAGGTGAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTTCATAAA 766381 Query 63230 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGT 63289 | |||| |||||| | || | ||||| |||||||| ||| ||| || ||||| Sbjct 766380 TAAATCACTAATCCATAAGGCAACAAATAAATCTCTGGCTCTGATTTCTTCTTTTCCGTG 766321 Query 63290 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63349 ||||||| | | || | ||| | | ||||||| |||||| ||||| ||||||| || Sbjct 766320 ATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAAGC 766261 Query 63350 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63409 | | | ||||| ||||| || || || || || | |||||||| ||||| || |||| Sbjct 766260 GAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAAAC 766201 Query 63410 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACT 63469 | || ||| || |||||||| || ||| | || || ||||| | ||||| ||| | Sbjct 766200 ACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCAGT 766141 Query 63470 GGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63529 | | ||||||| || || ||| || || || || | || || || ||||| || Sbjct 766140 TGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCACA 766081 Query 63530 TCGTTTTAAC-GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAAC 63588 | ||||||| || || || || || || || ||| || ||||| || | |||| Sbjct 766080 T-GTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAAAC 766022 Query 63589 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 63648 | ||||||||| | || || || |||||||| || ||||| || || || || | Sbjct 766021 AAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGTGA 765962 Query 63649 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--ATG 63706 | | || ||| | | ||| || || | ||| | || || || || | ||| Sbjct 765961 AATACTTCAAAGACATCAAATTATAAGTTTTGATAACATTATCAATGTC--ATCGCCATG 765904 Query 63707 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63766 ||| || || || || | ||| | ||||||||| ||||||||| ||| ||| | || Sbjct 765903 AATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCCATCTAC 765844 Query 63767 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 63824 | | || || || ||| || || ||||| |||||||| || || || ||||| || Sbjct 765843 TCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATTATAGTTGAAA--TCG 765786 Query 63825 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTG 63884 ||||| |||| |||| |||| || | || || | || | | || || || || Sbjct 765785 CGTTCATAAACAATAGCCGAATTCAATTCTTCTTCATGTCTTGCAATAATGTCATAAGTC 765726 Query 63885 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCC 63944 |||| || || ||||||||||| | || |||| |||| || | ||||| || Sbjct 765725 TCCTTTGAGATCATAGGAGAATGTTTTCTCGTTCTAGGGTTAATGTATTCATATAAAACC 765666 Query 63945 TCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTG 64004 | ||| |||| | ||| |||| | |||| || || |||||||| || || ||||| Sbjct 765665 TTCATGACTTGAGAGAATTGTTTGATGGTTTGTTTATGGAGATTTGAAACAGCAATTCTA 765606 Query 64005 GCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCC 64064 || || | ||| |||||||| ||||| ||||| | ||| || ||||| || ||| Sbjct 765605 GCAGCCAAAATAGCATAATCAGGATGAATAGTAGTCATATAGGCAGCAATTTCAGCCGCC 765546 Query 64065 AGAG 64068 ||| Sbjct 765545 TGAG 765542 >seq2 Length=2234776 Score = 214 bits (236), Expect = 2e-50 Identities = 599/909 (66%), Gaps = 24/909 (3%) Strand=Plus/Minus Query 32997 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33056 || |||||| || ||||| || ||| || | |||||||| ||||||||||| || Sbjct 2161586 AGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACC 2161527 Query 33057 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAA 33116 |||| || |||||||||||||| ||||| ||||||| | || |||| || || Sbjct 2161526 AGCCAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTT 2161467 Query 33117 TCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACA 33176 ||||| || || |||||||| || || ||||| | ||| ||| | | || Sbjct 2161466 GCCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCA 2161407 Query 33177 ATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGT-AAGAAATTCTTGTTCAATGGATA 33235 ||||| |||| | || || | ||| | || ||| | ||| ||| || | Sbjct 2161406 GTTCATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTT-TTCGATTTCGA 2161348 Query 33236 CCGCATCTGTTATAATAGATCTAACGGTTTCT---TCAC-TCGGTGGATGCAATAAATGT 33291 | || || || || || | ||| | | ||| || || | | ||| | | Sbjct 2161347 CAGCTTCAGTAATGATCTTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAATGAGAGA 2161288 Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351 ||| ||| || || || || || | ||| || ||||| | || | |||||| Sbjct 2161287 ATAA----CAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTA 2161232 Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411 || || ||||| || ||||||| || | ||| || ||||| || || ||||| || || Sbjct 2161231 GAGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAG 2161172 Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC----C 33467 || || ||||| || ||||| || ||||||||||||| | ||| || ||| ||| | Sbjct 2161171 CCCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCA-AACAATGC 2161113 Query 33468 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 | ||||| ||||| | |||||| || ||||| | ||| | || || || | Sbjct 2161112 TTCATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTT 2161053 Query 33528 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA- 33586 ||| || ||||| || | ||| | | ||| || | || || | ||||||||| |||| Sbjct 2161052 TTCAATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAG 2160993 Query 33587 -AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 33645 || || || |||| || || |||||||| || || || || || ||||| || Sbjct 2160992 TAAGGA--GTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCAC 2160935 Query 33646 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATT 33705 | || || | || || ||||| | | || ||| | ||||||||||| || || Sbjct 2160934 TTGGCTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATA 2160875 Query 33706 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33765 || ||| || ||||| || || || || | |||||| || |||| | || || Sbjct 2160874 CCATCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCAT-TGTCATT 2160816 Query 33766 ----AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAA 33821 | || | |||||||| | ||| || || || | ||||| | ||||| || Sbjct 2160815 CAAACGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAA 2160756 Query 33822 TGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAAC 33881 || || || || || |||||||| | |||||| |||| ||||| |||||||||| ||| Sbjct 2160755 GGAAGCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAAC 2160696 Query 33882 AAATCTATT 33890 |||||| || Sbjct 2160695 AAATCTTTT 2160687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947083197400