Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 233 5e-56 >seq5 Length=1485630 Score = 233 bits (258), Expect = 5e-56 Identities = 1115/1748 (64%), Gaps = 62/1748 (4%) Strand=Plus/Plus Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||| | || ||||| ||| | ||| | |||||| ||||||| ||| || || |||| Sbjct 765861 TGAAAGACCCCAGCACATGATTATGAGAGTTGCTGTTGGTATTCATGGCGATGACATTGA 765920 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTATT-CACGCACGCCACGCCA 363564 | | || |||| ||||| || | || | | ||||| ||| || || | || Sbjct 765921 TAATGTTATCAAAACTTATAA--TTTGATGTCTTTGAAGTATTTCACTCATGCATCACCT 765978 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAAT 363623 || ||| |||||||| || | | | || || ||||||||||| |||||| | || Sbjct 765979 ACTTTGTTTAATGCTGGTACACCTCAACCTCAAATGTCTTCTTG-TTTCTTGGTTGCCAT 766037 Query 363624 GAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAA 363683 |||||| ||||| || || || || | || || ||||| | ||||| | |||||||| Sbjct 766038 GAAGGAAGATTCAATTGAAGGCATTTACGATACTCTTAAAACATGTGCATTGATTTCCAA 766097 Query 363684 GAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTACA 363739 || ||| || || |||||| || ||||| ||| || | || || | ||| | Sbjct 766098 GACTGCTGGTGGTATTGGTTTACATATCCATAATATTAGATCA----ACTGGTTCTTATA 766153 Query 363740 TTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATA 363799 || || || ||| || ||||| | | |||||| | ||||| || |||| | Sbjct 766154 TTGCTGGTACTAACGGAACATCTAATGGTATTATCCCCATGATGCGTGTTTTCAACAACA 766213 Query 363800 CTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCG 363859 |||| || || || ||||| ||||| || ||| || || || ||| | || | | Sbjct 766214 CTGCTAGATATGTGGACCAAGGTGGTAATAAACGCCCTGGTGCTTTCGCTTTATACTTAG 766273 Query 363860 AGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAG 363918 | ||| ||| | ||||| ||||| || |||| | | || || ||||| |||||| Sbjct 766274 AACCTTGGCATCCTGATATCTTTGATTTCATTGACGTGAGAAAGAATCACGG-AAAAGAA 766332 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 ||| | | || | ||| | || ||| | ||| || ||| ||||||||| | Sbjct 766333 GAAATCAGAGCCAGAGATTTATTTGTTGCCTTATGGATTAGTGATTTATTTATGAAGAGA 766392 Query 363979 GTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 || ||||| || ||||||| |||||| || | ||| ||||||| | || ||| Sbjct 766393 GTTGAGGCTGGCGGTGATTGGTCTTTCTTTTCACCTAATGAAGCTCCAGGTTTATCTGAT 766452 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 | ||| | || | || ||| | || |||| |||||| || |||| ||| || Sbjct 766453 TGTTACGGTAAAGAATTTGAAGCTTTGTATGAAAGATATGAACGTGAAGGAAGAGCT-GT 766511 Query 364099 AAGA-CAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 |||| || | || || || || |||| | || |||| | || | ||| || || Sbjct 766512 AAGAACAGTGAAAGCTCAAAAACTTTGGTACTCTATTTTGGAAGCTCAAACTGAAACTGG 766571 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 || | ||| | || || || | || || |||||||| || || | ||||| Sbjct 766572 TGTCCCATTCATGCTTTATAAGGACGCTTGTAATGAGAAGTCCAATCAAAAGAATCTTGG 766631 Query 364218 TA----CAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACG 364273 | ||| ||| || || |||| || ||| |||||||| | |||| || | Sbjct 766632 TGTCATCAAATCA----AGTAATTTATGCTGTGAAATTGTTGAATACTCTTCTCCTGATG 766687 Query 364274 AGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA-----------A 364322 | ||| |||||||| | || || | || | || | ||||| | | Sbjct 766688 AAGTTGCTGTATGTAATTTGGCTTCTCTTGCTTTACCTACTTTTGTTACTGGTGATAGTA 766747 Query 364323 AGA-----TGGTAC--TTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTAC 364373 ||| |||||| |||||| | || | |||| || || | || || | | Sbjct 766748 AGAAGGGTTGGTACGATTTTGAGAA-----AT-TACATGAAGTCACTAAGGTCTTGGTTC 766801 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 | ||| | |||| | || || | ||||||||||| ||||||| ||| || || Sbjct 766802 AT--AATTTGAACAAAATCATTGATAGAAATTATTATCCTGTTCCTGAGGCCAAGTACTC 766859 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || | | | || | || |||| | ||||||| || || || |||| | |||||| Sbjct 766860 CAACAAGAGAAATAGGCCTATTGCTATTGGTGTCCAAGGTCTTTCTGATGCCTTTATG-- 766917 Query 364494 GC-TCAAGATGGC-ATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551 || | ||||| || ||||||||| ||||| ||| | |||| ||||||||||| Sbjct 766918 GCATTAAGATTGCCATTTGATTCACCTGAAGCTAAACAATTGAATATCCAGATCTTTGAA 766977 Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTAC 364611 || || || ||| ||| | || || ||| ||||| |||| | ||| || Sbjct 766978 ACTATTTACCATGCTGCAGTTGAAGCCTCAGTTGACTTGGCCAAAATTGAAGGACCTTAT 767037 Query 364612 TCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTC 364671 |||||| | || || | | |||| |||| || |||||||| ||| | | Sbjct 767038 CAAACTTATAAAACATCGCCAGCTGCTAAGGGTCAATTACAATTTGATCTTTGGGGTATT 767097 Query 364672 ACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTAC 364730 | ||| ||| |||| | |||||| | | | | ||| ||| |||||||| | Sbjct 767098 AAACCAACTGATTTATGGGATTGGGATTCTTTGAAGAGACAA-GTTGCTAAGCATGGAAT 767156 Query 364731 TCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAA 364790 | | ||||| || | || || ||||| || || |||||| | || || || || Sbjct 767157 TAGAAACTCTCTTTTAGTTGCTCCTATGCCAACTGCATCTACTTCTCAAATTCTTGGTTT 767216 Query 364791 CAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGA 364850 ||| || || |||||||| | ||| ||| | || || | | ||| | | || || Sbjct 767217 CAATGAATGTTTCGAACCATATACTTCTAATATCTACTCTAGAAGAGTTTTGGCTGGTGA 767276 Query 364851 ATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGA 364910 ||||| | |||||| | || | ||||| ||| || || | |||| ||| Sbjct 767277 ATTTCAAATTGTTAATCCATGGTTACTTAAGGACCTTGTTGAATTGGGCATTTGGGATGA 767336 Query 364911 CAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC 364970 ||||||||| | || ||||| | |||||| ||| | || || ||| || |||| Sbjct 767337 TTCTATGAAGAACAAGATTATCGCTGATAATGGCTCTATTCAAAATATTACAAACATTCC 767396 Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC-TCATTG 365029 | | || ||||| | |||||||| ||||||| | || | || || | |||| Sbjct 767397 AAAGGAATTGAAGGAATTGTACAAAACTACATGGGAATTATCTCAGA-AAGTCATTATTG 767455 Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGA 365089 ||||||| || || | ||| | || || ||| ||||| | || | | ||| | Sbjct 767456 ATATGGCTGCTGACAGAGGTCCATTCATTGATCAATCACAGTCAATGAATATCTACATTA 767515 Query 365090 CTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTA 365149 | |||||| |||||||| | |||||||||||||| |||||| ||||||| Sbjct 767516 GAGAACCAACCATGAAAAAGCTTACTGCTATGCATTTCTACGGTTGGAAAAAGGGTCTTA 767575 Query 365150 AGACAGGT 365157 |||| ||| Sbjct 767576 AGACTGGT 767583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353349511730