Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 1e-13
seq4 82.4 7e-11
>seq1
Length=2480924
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
||||| || || |||||||| || | |||||| | ||||| || | |||||| ||
Sbjct 1632910 TTTGTTAAGACCTTAACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACTATT 1632851
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| | |||||| |||||| ||||| ||||| || || || ||||||||| | ||
Sbjct 1632850 GACAATGTCAAAAGCAAGATTCAAGACAAGGAAGGAATTCCACCAGATCAACAGCGTTTG 1632791
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || |||||| | ||||| | |||| | || || |||||||||||
Sbjct 1632790 ATCTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTTTGTCTGACTACAACATTCAAAAG 1632731
Query 24180 GAATCTACAATTCATTTAGTGTT 24202
|| ||||| | ||||| || ||
Sbjct 1632730 GAGTCTACTCTCCATTTGGTCTT 1632708
>seq4
Length=1903616
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | || || || || | || || || | ||||| |||| || ||| |
Sbjct 1735484 ATGCAAATTTTCGTTAAGACCCTTACGGGTAAGACTATTACTCTCGAGGTTGAGTCTTCA 1735425
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | ||||| |||||| ||||||||||| || ||||| ||||||
Sbjct 1735424 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGAATTCCTCCAGATCAA 1735365
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | |||| | | || ||||| | ||||||| |||| | | || || |||
Sbjct 1735364 CAACGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACCCTTTCTGACTACAAC 1735305
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTA 24203
|| ||||| ||||| || | ||||| || |||
Sbjct 1735304 ATCCAAAAGGAATCGACCCTCCATTTGGTCTTA 1735272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935921402325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |