Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4 102 8e-17
seq1 91.5 1e-13
>seq4
Length=1903616
Score = 102 bits (112), Expect = 8e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| | || ||||| | |||||| |||||||| |||||||| ||
Sbjct 1735258 CCACCACGGAGACGTAAGACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGAA 1735317
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| | || || | |||||| || || |||| ||||| || || || |||||
Sbjct 1735318 AGGGTTCTTCCATCTTCCAACTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 1735377
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||||||||| || || ||||| | || | || || | ||||| |
Sbjct 1735378 ATTCCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGACTCAACC 1735437
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|||| |||| || ||||| || || || || |||||||| |||||||
Sbjct 1735438 TCGAGAGTAATAGTCTTACCCGTAAGGGTCTTAACGAAAATTTGCATGA 1735486
>seq1
Length=2480924
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || ||||| | || |||||||||||||||||||| || |
Sbjct 1632693 CCACCACGGAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 1632752
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || | ||| |||| ||||| || || |||| |||||||| || || || ||
Sbjct 1632753 AAAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGGA 1632812
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC--TTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||||||| ||||| ||| | | ||| |||| | || | ||| |||| || || |
Sbjct 1632813 ATTCCTTCCTTGTC-TTGAATCT-TGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAA 1632870
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226
|| | ||||| || ||||| |||| || || || |||
Sbjct 1632871 CTTCCAAGGTAATAGTCTTACCAGTTAAGGTCTTAACAAAA 1632911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012711497600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |