Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5 508 7e-139 seq2 255 7e-63 >seq5 Length=1485630 Score = 508 bits (562), Expect = 7e-139 Identities = 1392/2110 (66%), Gaps = 57/2110 (3%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 || || ||||| | || | ||| | || || | | ||||||||| || || || ||| Sbjct 767630 GTAAACTGAATAGCTGCTGCTGCTGCTTGAGTTCTCAAATAGTACATACCAGTCTTAAGA 767571 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAG-TTTGGAATAACTCGGATCTGCTAT 61968 || |||| ||||| ||||||||| || || ||| || | || ||| || Sbjct 767570 CCCTTTTTCCAACCGTAGAAATGCATAGCAGTAAGCTTTTTCATGGTT-GGTTCTCTAAT 767512 Query 61969 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62028 | ||||||||| || || |||||| ||||| | || ||||| |||||||| | || Sbjct 767511 GTAGATATTCATTGACTGTGATTGATCAATGAATGGACCTCTGTCAGCAGCCATATCAAT 767452 Query 62029 AATCGTCTTT-TGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 ||| | |||| || | | |||||| ||||||| || | | ||| | || | ||||| Sbjct 767451 AAT-GACTTTCTGAGATAATTCCCATGTAGTTTTGTACAATTCCTTCAATTCCTTTGGAA 767393 Query 62088 GGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62144 ||||||| || ||||| || ||| ||| || |||||| | ||||| || ||||| Sbjct 767392 TGTTTGTAATATTTTGAATAGAGCCATTATCAGCGATAATCTTGTTCTTCATAGAATCAT 767333 Query 62145 TCCATAATTTTCTCTCGGTTAAAAC--TC--TAAGGAGATGCGGATTAACTACTTGAAAT 62200 ||| ||| | | | || | || |||| | |||||||| | ||||||| Sbjct 767332 CCCA-AATGCCCAAT---TCAACAAGGTCCTTAAGTAACCATGGATTAACAATTTGAAAT 767277 Query 62201 TCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTA 62260 || |||| ||| ||||| | || ||| |||||| ||||| ||||| | | | ||||| Sbjct 767276 TCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGGTTCGAAACATTCATTG 767217 Query 62261 TTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTA 62320 || | |||||||| ||| |||||||| |||||||| || || || | | |||||| Sbjct 767216 AAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACTAAAAGAGAGTTTCTA 767157 Query 62321 AGACCGTATGTTCTG-ATTTTATCTTTT-AGAGGTTCCCAATTCCAAAGATCCGACGGTA 62378 | || ||| | | | || ||| || | || ||||||| ||| | ||| | ||| Sbjct 767156 ATTCC--ATGCTTAGCAACTTGTCTCTTCAAAGAATCCCAATCCCATAAATCAGTTGGTT 767099 Query 62379 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62438 || ||||| ||| ||| || |||| | ||| || | Sbjct 767098 TAATACCCCAAAGATCAAATTGTAATTGACCCTTAGCAGCTGGCGATGTTTTATAAGTTT 767039 Query 62439 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTC--GCCTCTAATGCACCGTAATAAAT 62496 || |||||||| | | || | ||| ||| || || | |||| | | ||||| Sbjct 767038 GATAAGGTCCTTCAATTTTGGCCAAGTCA--ACTGAGGCTTCAACTGCAGCATGGTAAAT 766981 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAA 62556 ||||| ||||||| |||| | | || ||||| | ||||||||| | |||| Sbjct 766980 AGTTTCAAAGATCTGGATATTCAATTGTTTAGCTTCAGGTGAATCAAATGGCAATCTTAA 766921 Query 62557 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62616 ||||| || || | | ||||| ||||||||| | ||||| |||| |||||| || Sbjct 766920 TGCCATAAAGGCATCAGAAAGACCTTGGACACCAATAGCAATAGGCCTATTTCTCTTGTT 766861 Query 62617 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62676 ||| | || || |||| |||||||||||| |||| || ||||| || | ||| Sbjct 766860 GGAGTACTTGGCCTCAGGAACAGGATAATAATTTCTATCAATGATTTTGTTCAAATTATG 766801 Query 62677 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCAT-----CTATT 62731 || | || || || || | | ||| |||||| | | || | |||| Sbjct 766800 AACCAAGACCTTAGTGACTTCATGTAATTTCTCAAAATCGTACCAACCCTTCTTACTATC 766741 Query 62732 ACAA-----ACATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 62784 || | | | || || |||| ||| |||| |||||| || || || |||| || Sbjct 766740 ACCAGTAACAAAAGTAGGTAAAGCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGG 766681 Query 62785 ATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 62844 | | |||| | || ||| ||| | |||||| | |||||| || | ||| | Sbjct 766680 AGAAGAGTATTCAACAATTTCACAGCATAAATTACTTGATTTGATGACACCAAGATTCTT 766621 Query 62845 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAAT 62904 |||||| ||| | ||||| || ||||||||||| |||||||| |||||||||| | Sbjct 766620 TTGATTGGACTTCTCATTACAAGCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGT 766561 Query 62905 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT 62964 |||| ||| | ||| | | ||| | | |||| || | | | || | ||||| Sbjct 766560 TTGAGCTTCCAAAATAGAGTACCAAAGTTTTTGAGCTTTCACTGTTC--TTACAGCTCTT 766503 Query 62965 --TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGT 63022 ||| | ||| ||| | |||||| ||| || || | | || |||| | ||| Sbjct 766502 CCTTCACGTTCATATCTTTCATACAAAGCTTCAAATTCTT-TACCGTAACAAT---CAGA 766447 Query 63023 ----CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 || ||| ||||| || | | || ||||| || ||| || ||| |||| || Sbjct 766446 TAAACCTGGAGCTTCATTAGGTGAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTT 766387 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 |||||| | |||| |||||| | || | ||||| |||||||| ||| ||| || || Sbjct 766386 CATAAATAAATCACTAATCCATAAGGCAACAAATAAATCTCTGGCTCTGATTTCTTCTTT 766327 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 ||| ||||||| | | || | ||| | | ||||||| |||||| ||||| ||||| Sbjct 766326 TCCGTGATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTA 766267 Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258 || || | | | ||||| ||||| || || || || || | |||||||| ||||| || Sbjct 766266 TAAAGCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTT 766207 Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318 |||| | || ||| || ||||||||||| ||||| || || || || | ||||| Sbjct 766206 GAAAACACGCATCATGGGGATAATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGA 766147 Query 63319 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378 ||| | | | ||||||| || || ||| || || || || | || || || || Sbjct 766146 ACCAGTTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAA 766087 Query 63379 TGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 ||| ||| ||||||| ||||| || ||||| || || ||| ||| ||||| || | Sbjct 766086 TGCACAT-GTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCA 766028 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 ||||| ||||||||| | || || || |||||||| || ||||| || || | Sbjct 766027 AGAAACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCAT 765968 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63557 |||| || | || ||| | | ||| || || | ||| | | | | || ||| Sbjct 765967 GAGTGAAATACTTCAAAGACATCAAATTATAAGTTTTGATAAC--ATTATCAATGTCATC 765910 Query 63558 G--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615 | |||||| || || || || | ||| | ||||||||| ||||||||| ||| ||| Sbjct 765909 GCCATGAATACCAACAGCAACTCTCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCC 765850 Query 63616 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 63673 | || | | || || || ||| || || ||||| |||||||| || || || |||| Sbjct 765849 ATCTACTCTTAATAAATAAGATCGCTCTAATGTTTTGAAACCAAAGTAATTATAGTTGAA 765790 Query 63674 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 63733 | || ||||| |||| |||| |||| || | || || | || | | || | || Sbjct 765789 A--TCGCGTTCATAAACAATAGCCGAATTCAATTCTTCTTCATGTCTTGCAATAATGTCA 765732 Query 63734 ATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAAT 63793 || |||| || |||||| ||||||| | || |||| || | || | || Sbjct 765731 TAAGTCTCCTTTGAGATCATAGGAGAATGTTTTCTCGTTCTAGGGTTAATGTATTCATAT 765672 Query 63794 AAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCT 63853 ||| ||| ||| |||| | ||| |||| | |||| ||| || |||||||| || || Sbjct 765671 AAAACCTTCATGACTTGAGAGAATTGTTTGATGGTTTGTTTATGGAGATTTGAAACAGCA 765612 Query 63854 ATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCG 63913 |||||||| || | ||| |||||||| ||||| ||||| | ||| || ||||| Sbjct 765611 ATTCTAGCAGCCAAAATAGCATAATCAGGATGAATAGTAGTCATATAGGCAGCAATTTCA 765552 Query 63914 GCTGCCAGAG 63923 || ||| ||| Sbjct 765551 GCCGCCTGAG 765542 >seq2 Length=2234776 Score = 255 bits (282), Expect = 7e-63 Identities = 611/913 (67%), Gaps = 32/913 (4%) Strand=Plus/Minus Query 32354 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 32413 || |||||| || ||||| || ||| || | |||||||| |||||||||||||| Sbjct 2161586 AGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACC 2161527 Query 32414 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAA 32473 | || || |||||||||||||| || |||||||||| | || |||| || || Sbjct 2161526 AGCCAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTT 2161467 Query 32474 TCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 32533 ||||| || || ||||||||||| |||||||| | ||| ||| | | || Sbjct 2161466 GCCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCA 2161407 Query 32534 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGA 32592 ||||| |||| | || || | ||| | || ||| | ||| ||| || || Sbjct 2161406 GTTCATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTT-TTCGATTTCGA 2161348 Query 32593 CCGCGTCTGTTATAATAGATCTT----ACTGTTTCT---TCAC-TCGGTGGATACAATAA 32644 | || || || || |||||| || | | ||| || || | | ||| | Sbjct 2161347 CAGCTTCAGTAAT----GATCTTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAATGA 2161292 Query 32645 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 32704 | ||| ||| || || || || |||| ||| || ||||| | || ||||| Sbjct 2161291 GAGAATAA----CAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTC 2161236 Query 32705 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 32764 ||| || || ||||| || ||||||| || | ||| || ||||| || || || ||||| Sbjct 2161235 GTTAGAGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAA 2161176 Query 32765 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC- 32823 || || || |||||||| ||||| || || |||||||||| | ||| || ||| ||| Sbjct 2161175 CGAGCCCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCA-AACA 2161117 Query 32824 ---CGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 32880 | | ||||| ||||| | |||||| || ||||| | ||| | || || | Sbjct 2161116 ATGCTTCATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAA 2161057 Query 32881 TTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAA 32940 | | || |||||||| || | ||| | | ||| || | || || | ||| ||||||| Sbjct 2161056 TGTTTTCAATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAA 2160997 Query 32941 TCA--AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 32998 ||| || || || |||| || || |||||||| || ||||| || || ||||| Sbjct 2160996 TCAGTAAGGAGTAAG--TTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAA 2160939 Query 32999 GCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 33058 ||| | || || | || || ||||| | | || |||| ||||||||||||| || Sbjct 2160938 GCACTTGGCTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAAC 2160879 Query 33059 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 33118 || || ||| || ||||| || || || || | |||||| || |||| | || Sbjct 2160878 AATACCATCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCAT-TGT 2160820 Query 33119 TGTT----AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCC 33174 || | || | |||||||| | ||| || || || | ||||| | |||| Sbjct 2160819 CATTCAAACGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCC 2160760 Query 33175 AAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAA 33234 | || || || || || || |||||||| | |||||| |||||||||| |||||| |||| Sbjct 2160759 AGAAGGAAGCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAA 2160700 Query 33235 TAACAAATCTATT 33247 ||||||||| || Sbjct 2160699 GAACAAATCTTTT 2160687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631881194000