Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2 250 3e-61
>seq2
Length=2234776
Score = 250 bits (276), Expect = 3e-61
Identities = 607/912 (67%), Gaps = 7/912 (1%)
Strand=Plus/Minus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| ||||| || || |||| | ||||| |||||||| || || || |
Sbjct 2161583 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGC 2161524
Query 92850 CAAAGATATCGAATTCACTA-GTGAT-TGGATTCTTGGCGTTATAATACTTTTCACCGAT 92907
|||||| || | || | || | |||||| | ||| ||| ||| | |
Sbjct 2161523 CAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTTGCC 2161464
Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967
||| | | ||||||||| || |||||||| | |||||| |||| | | || ||
Sbjct 2161463 CAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCAGTT 2161404
Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGC 93027
||| |||| | | ||||| | ||| ||||| ||| | | || |||||| | || ||
Sbjct 2161403 CATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGACAGC 2161344
Query 93028 TTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTT-TTGTACGACATAATTGTACA 93086
||| | | ||| | | || || | ||| | |||| | | || | | | |
Sbjct 2161343 TTCAGTAATGATCTTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAA-ATGAGAGAATA 2161285
Query 93087 TTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATG 93146
||||| |||||||| |||||||||||||| |||| | ||||| || || |||||
Sbjct 2161284 ACAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATG 2161225
Query 93147 TTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaa 93206
| | ||| || | | |||| ||||||||||| || || |||||||| || || |
Sbjct 2161224 TGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGA 2161165
Query 93207 aaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTAC 93266
| || |||||||| || || ||||| || || | | ||| |||| ||| ||
Sbjct 2161164 AGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTTCATCGT 2161105
Query 93267 TGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326
|||||||| ||||||||| || || |||| || || || || | |||| ||||
Sbjct 2161104 CATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCAATAG 2161045
Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386
| || |||| |||||| || | | || || || ||||| || | | || |
Sbjct 2161044 CATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAGTAAGGAGT 2160985
Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446
| ||||||| |||| || ||||| |||||||| || ||||| || | ||||| |
Sbjct 2160984 AAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGGCTTCAG 2160925
Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506
| || ||||| || || | ||||| | ||||||||| || |||||||| ||||
Sbjct 2160924 GAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCATCAGATG 2160865
Query 93507 CTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTC-TCATCATCTTTAAGCTTAT 93563
| ||||| ||||| || | || || ||||| |||| | |||| | | || |
Sbjct 2160864 CAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCATTGTCATTCAAACGGTTTT 2160805
Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623
||||||| | ||| ||| | || | ||||| ||||||| || || ||||| |
Sbjct 2160804 CCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAGCTTCAG 2160745
Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAG 93683
|||| || ||||| | ||| || || ||||||| |||||| || | ||||| | |||
Sbjct 2160744 CTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAATCTTTTAT 2160685
Query 93684 GGTTATCTTTTA 93695
||| || ||||
Sbjct 2160684 CGTTTTCCTTTA 2160673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860695588600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |