Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 1e-11 >seq5 Length=1485630 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 100878 GCAAAGGCATCAGCATTTGGAACCGTCGCAGACAAAAACACACAGCGAATGTGATCTGGC 100937 ||||| || |||||||||| | || ||||| | || ||| | |||| | |||||| Sbjct 913853 GCAAATTCAGCAGCATTTGGTATAGTTGCAGAAAGGAATACAAATCGAACATTATCTGGT 913912 Query 100938 ATCAGAATGAGGCTTTCTTCCCACACTGTTCCGCGTTTTGCATCATTCATATAATGCACT 100997 | || |||| | ||||||||||||| || |||| | ||| ||||||| || ||| Sbjct 913913 AACAAGATGATGGTTTCTTCCCACACAACACCACGTTCTTTATCTCTCATATAGTGAACT 913972 Query 100998 TCGTCAAAGATAACCCA 101014 || ||||| |||||||| Sbjct 913973 TCATCAAAAATAACCCA 913989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836602462615