Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq4 100 7e-16
seq1 100 7e-16
>seq4
Length=1903616
Score = 100 bits (110), Expect = 7e-16
Identities = 165/234 (71%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTC-TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||||| ||||| | |||| || | ||| | || ||| |||||||| || ||||| |
Sbjct 1735258 CCACCACGGAGACGTAAG-ACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGA 1735316
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| || | ||| ||||| || || || || || ||||||| ||| |||||| |||||
Sbjct 1735317 AAGGGTTCTTCCATCTTCCAACTGCTTACCAGCAAAGATCAAACGTTGTTGA---TCTGG 1735373
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
||||||||||| || || || || | || || || || || | || || ||
Sbjct 1735374 AGGAATTCCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGACTC 1735433
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476
|| ||||| || || ||||| || || || ||||| ||||| || ||||| ||
Sbjct 1735434 AACCTCGAGAGTAATAGTCTTACCCGTAAGGGTCTTAACGAAAATTTGCATGAT 1735487
>seq1
Length=2480924
Score = 100 bits (110), Expect = 7e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| ||||| | || || ||||||||||||||||| ||||| || ||
Sbjct 1873684 TTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAA 1873625
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | || ||| ||| || ||||| || || || || || || || ||
Sbjct 1873624 GATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATT 1873565
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| | ||||| || || || |||| ||||| ||
Sbjct 1873564 GTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARGTCTTCAC 1873505
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 1873504 GAAAATTTGCAT 1873493
Score = 100 bits (110), Expect = 7e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| ||||| | || || ||||||||||||||||| ||||| || ||
Sbjct 1873912 TTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAA 1873853
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | || ||| ||| || ||||| || || || || || || || ||
Sbjct 1873852 GATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATT 1873793
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| | ||||| || || || |||| ||||| ||
Sbjct 1873792 GTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARGTCTTCAC 1873733
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 1873732 GAAAATTTGCAT 1873721
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| ||||| | || || ||||||||||||||||| ||||| || ||
Sbjct 1873456 TTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAA 1873397
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | || ||| ||| || ||||| || || || || || || || ||
Sbjct 1873396 GATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATT 1873337
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| | ||||| || || || |||| ||||| ||
Sbjct 1873336 GTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAAGGTCTTAAC 1873277
Query 288462 GAATATCTGCAT 288473
|| ||||||||
Sbjct 1873276 AAAGATCTGCAT 1873265
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||| ||||| ||||| | || || ||||||||||||||||| ||||| || ||
Sbjct 1874140 TTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAA 1874081
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | || ||| ||| || ||||| || || || || || || || ||
Sbjct 1874080 GATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATT 1874021
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| | ||||| || || || |||| ||||| ||
Sbjct 1874020 GTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAAGGTCTTCAC 1873961
Query 288462 GAATATCTGCAT 288473
||| || |||||
Sbjct 1873960 GAAAATTTGCAT 1873949
Score = 95.1 bits (104), Expect = 3e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||| | | || | ||||||||||||||| || || || |||
Sbjct 1632729 TCCTTTTGAATGTTGTAGTCAGACAAAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAG 1632788
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| |||||||||| ||| |||||||| || || || || || ||| || ||
Sbjct 1632789 ATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTGTCTTGAATCTTGCTTTTGACATTG 1632848
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| ||| ||||| ||||| | || || ||||| || || | ||||| ||
Sbjct 1632849 TCAATAGTGTCGGAAGATTCAACTTCCAAGGTAATAGTCTTACCAGTTAAGGTCTTAACA 1632908
Query 288463 AA 288464
||
Sbjct 1632909 AA 1632910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654173285170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |