Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 1e-14
seq4 93.3 4e-14
>seq2
Length=2234776
Score = 95.1 bits (104), Expect = 1e-14
Identities = 180/265 (68%), Gaps = 0/265 (0%)
Strand=Plus/Minus
Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935
|||||| ||| | ||||||||||||||| ||| || || || || ||| | || |
Sbjct 2161298 CAAATGAGAGAATAACAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAA 2161239
Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995
|||||| ||| || | || ||||| | || | || |||||||| || || | ||
Sbjct 2161238 TTCGTTAGAGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGC 2161179
Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055
|| |||||| ||||| | || || || || || || || || | | || || ||
Sbjct 2161178 AAACGAGCCCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAA 2161119
Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115
| ||||| | | |||||| || | |||||||| ||||||| ||||| ||| ||
Sbjct 2161118 CAATGCTTCATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGG 2161059
Query 133116 CATCGTTTCGATGGCGTTCAACAAA 133140
|| |||| || || || || |||
Sbjct 2161058 AATGTTTTCAATAGCATTGAATAAA 2161034
>seq4
Length=1903616
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || ||||| || || || || |||| || ||| | |
Sbjct 1735484 ATGCAAATTTTCGTTAAGACCCTTACGGGTAAGACTATTACTCTCGAGGTTGAGTCTTCA 1735425
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || || | |||||||| |||||||| | || |||
Sbjct 1735424 GACACCATTGACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGAATTCCTCCAGATCAA 1735365
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | || | || || || ||| |||| || | | ||||| |||||||||
Sbjct 1735364 CAACGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACCCTTTCTGACTACAAC 1735305
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGT 38452
|||||||||||| |||| || ||||||||
Sbjct 1735304 ATCCAAAAGGAATCGACCCTCCATTTGGT 1735276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172706217600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |