Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 104 3e-17 seq1 86.0 7e-12 >seq5 Length=1485630 Score = 104 bits (114), Expect = 3e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTA 110934 |||||||| | |||||||||||| || ||| ||| |||||| | | || ||| Sbjct 766127 TGGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCACATGTTTTAAGAGTA 766068 Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994 | ||||| || ||||| |||||| |||| |||||| | || ||||||||||| ||| Sbjct 766067 TCGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAAACAAGAAGACATTTGA 766008 Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 || |||| || || ||||| || | ||||||| |||||| |||| Sbjct 766007 GGTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGTGAA 765961 >seq1 Length=2480924 Score = 86.0 bits (94), Expect = 7e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 158478 TTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACTGTATCAACGTTGGTGC 158537 |||||| | ||||| || || || ||||||||||| || || |||| | |||||| Sbjct 507358 TTATGGAAGAGTGGCCCCCCGATCAGGTTTGGCTGTCAAACATGGTATTTCCACTGGTGC 507299 Query 158538 GGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTCTCTTCAATCATGGAGA 158597 || || |||||| ||||||||| |||||||| || || ||| | || || ||| || Sbjct 507298 TGGTGTTATCGATGCTGATTATAGAGGAGAAGTGAAGGTTGTTTTGTTTAACCATTCGGA 507239 Query 158598 CAAGGACTTTGA 158609 ||||| ||||| Sbjct 507238 AAAGGATTTTGA 507227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975889567000