Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 122 1e-22 seq11 86.0 7e-12 >seq5 Length=1485630 Score = 122 bits (134), Expect = 1e-22 Identities = 409/627 (65%), Gaps = 11/627 (2%) Strand=Plus/Minus Query 106759 GAAAAGA--GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 106816 ||||||| ||||| | ||| || ||||||| | |||||| || | || |||||| Sbjct 766424 GAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTTCATAAATAAATCACTAATCCAT 766365 Query 106817 AGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875 | || ||| | |||||| | | || ||||| | || || || || | || Sbjct 766364 AAGGCAACAAATAAATCTCTGGCTCTGATT-TCTTCTTTTCCGTGATTCTTTCTCACGTC 766306 Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 106935 || ||| || | |||||| | ||||| || || | || | |||| || || || Sbjct 766305 AATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAAGCGAAAGCACCAGGGCG 766246 Query 106936 ---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992 | ||| |||| | ||||| | || ||| ||| || || || | ||| || || Sbjct 766245 TTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAAACACGCATCATGGGGAT 766186 Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052 |||||||| ||| || || || || |||| ||| | | | ||| | || ||| Sbjct 766185 AATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCAGTTGATCTAATATTATG 766126 Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112 ||| || | |||||||| ||||| ||| || || ||||| ||||||| | Sbjct 766125 GATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCACATGTTTTAAGAGTATC 766066 Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172 || || || | ||||| || ||||| |||| | | ||| ||| ||||| || || Sbjct 766065 GTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAAACAAGAAGACATTTGAGG 766006 Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACA 107231 | |||||||||||||| || | || |||| ||| ||| |||| |||| | |||| Sbjct 766005 TTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGTGAA-ATACTTCAAAGACA 765947 Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291 || | || || | | ||| ||||||||| || || || || || | || || | Sbjct 765946 TCAAATTATAAGTTTTGATAACATTATCAATGTCATCGCCATGAATACCAACAGCAACTC 765887 Query 107292 GCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGAT-AGCTC 107350 ||||| ||||| |||||| |||| || ||||||| | | | | || || || Sbjct 765886 TCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCCATCTACTCTTAATAAATAAGATC 765827 Query 107351 TTCTCAAGGGTTTTGAGACCAAAGTAA 107377 ||| | ||||||| |||||||||| Sbjct 765826 -GCTCTAATGTTTTGAAACCAAAGTAA 765801 >seq11 Length=408711 Score = 86.0 bits (94), Expect = 7e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640 |||| || || |||||| ||||| |||||||| | ||||| |||||| |||| | |||| Sbjct 179622 GCCTCAGTTCTGAGATAATACATTCCGGTCTTTAATCCTTTTTTCCAACCGTAGAAATGC 179681 Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700 || | | ||||| ||| || || | ||||||||| |||||| ||||| || Sbjct 179682 ATCGTCGTAAGCTTTCGCATGGTGGGCTCTGCCATGAAAATATTCATGCTTTGGGATTGA 179741 Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735 |||||||| || | | || ||||||||||| Sbjct 179742 TCAATGAATGCTCCTCTATCAGCTGCCATATCAAT 179776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980689378600