Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq5 122 1e-22
seq11 86.0 7e-12
>seq5
Length=1485630
Score = 122 bits (134), Expect = 1e-22
Identities = 409/627 (65%), Gaps = 11/627 (2%)
Strand=Plus/Minus
Query 106759 GAAAAGA--GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 106816
||||||| ||||| | ||| || ||||||| | |||||| || | || ||||||
Sbjct 766424 GAAAAGAAAGACCAATCACCGCCAGCCTCAACTCTCTTCATAAATAAATCACTAATCCAT 766365
Query 106817 AGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875
| || ||| | |||||| | | || ||||| | || || || || | ||
Sbjct 766364 AAGGCAACAAATAAATCTCTGGCTCTGATT-TCTTCTTTTCCGTGATTCTTTCTCACGTC 766306
Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 106935
|| ||| || | |||||| | ||||| || || | || | |||| || || ||
Sbjct 766305 AATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAAGCGAAAGCACCAGGGCG 766246
Query 106936 ---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992
| ||| |||| | ||||| | || ||| ||| || || || | ||| || ||
Sbjct 766245 TTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAAACACGCATCATGGGGAT 766186
Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052
|||||||| ||| || || || || |||| ||| | | | ||| | || |||
Sbjct 766185 AATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCAGTTGATCTAATATTATG 766126
Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112
||| || | |||||||| ||||| ||| || || ||||| ||||||| |
Sbjct 766125 GATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCACATGTTTTAAGAGTATC 766066
Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172
|| || || | ||||| || ||||| |||| | | ||| ||| ||||| || ||
Sbjct 766065 GTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAAACAAGAAGACATTTGAGG 766006
Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACA 107231
| |||||||||||||| || | || |||| ||| ||| |||| |||| | ||||
Sbjct 766005 TTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGTGAA-ATACTTCAAAGACA 765947
Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291
|| | || || | | ||| ||||||||| || || || || || | || || |
Sbjct 765946 TCAAATTATAAGTTTTGATAACATTATCAATGTCATCGCCATGAATACCAACAGCAACTC 765887
Query 107292 GCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGAT-AGCTC 107350
||||| ||||| |||||| |||| || ||||||| | | | | || || ||
Sbjct 765886 TCATAATCATGTGCTGGGGTCTTTCAGCGACTTTGCCATCTACTCTTAATAAATAAGATC 765827
Query 107351 TTCTCAAGGGTTTTGAGACCAAAGTAA 107377
||| | ||||||| ||||||||||
Sbjct 765826 -GCTCTAATGTTTTGAAACCAAAGTAA 765801
>seq11
Length=408711
Score = 86.0 bits (94), Expect = 7e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640
|||| || || |||||| ||||| |||||||| | ||||| |||||| |||| | ||||
Sbjct 179622 GCCTCAGTTCTGAGATAATACATTCCGGTCTTTAATCCTTTTTTCCAACCGTAGAAATGC 179681
Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700
|| | | ||||| ||| || || | ||||||||| |||||| ||||| ||
Sbjct 179682 ATCGTCGTAAGCTTTCGCATGGTGGGCTCTGCCATGAAAATATTCATGCTTTGGGATTGA 179741
Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAAT 105735
|||||||| || | | || |||||||||||
Sbjct 179742 TCAATGAATGCTCCTCTATCAGCTGCCATATCAAT 179776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980689378600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |