Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq2 147 3e-30
>seq2
Length=2234776
Score = 147 bits (162), Expect = 3e-30
Identities = 198/273 (73%), Gaps = 6/273 (2%)
Strand=Plus/Plus
Query 153746 TGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCA 153805
||||||||| |||| | || || |||||| |||| ||||| ||||| ||||| ||
Sbjct 1089934 TGATATTGCCTTAGGATCTGCTCAGAGATTTGGTGTTCCAATGGGTTATGGTGGTCCACA 1089993
Query 153806 TGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGA---ATTGT 153862
|||||| |||||||| || | |||| || | || || ||||| ||| ||||
Sbjct 1089994 TGCTGCTTTCTTTGCTGTAAGCAATAAGTTCAATCGTAAAATGCCTGGTAGACTAATTGG 1090053
Query 153863 AGGTCAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGA 153922
||||||| | |||||| |||| || || | ||||| || |||||||| | ||
Sbjct 1090054 -GGTCAGTAA--AGATAGATTAGGTGATCCTGCTTTAAGATTGGCTTTACAGACTCGTGA 1090110
Query 153923 GCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGC 153982
||||||||||| |||||| ||||| |||||||| || || || ||||| || | || ||
Sbjct 1090111 GCAGCATATCAAGAGAGAAAAAGCTACCAGTAATATTTGTACTGCTCAAGCTTTACTTGC 1090170
Query 153983 TAATATGTCTGGATTCTATGCAGCATATCATGG 154015
|||||| | || ||||| | |||||||||
Sbjct 1090171 CAATATGGCCGGTGCTTATGCTGTATATCATGG 1090203
Score = 141 bits (156), Expect = 1e-28
Identities = 165/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 153206 TATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGA 153265
||| ||| |||| ||| ||| |||| |||||| |||| || | ||||| |||||||
Sbjct 1089379 TATTGGTAAAGGTTACASTGGTACCAATACACCTGCAGTTATCCTTAGAAACATTCTTGA 1089438
Query 153266 GAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATT 153325
|||| ||||||||||| || || || ||||| | || || ||||| || ||| |
Sbjct 1089439 ATGTCCTGAATGGTACACATCATATACACCTTATCAGCCAGAAATTTCTCAAGGTAGACT 1089498
Query 153326 GGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAA 153385
|| ||| |||| || || ||||| | | | || | || ||||||||||| || ||
Sbjct 1089499 TGAGGCTCTATTGAACTATCAAACTGTTGTTTCTGATTTGACTGGATTACCAATTGCTAA 1089558
Query 153386 CGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428
|| ||| || |||| |||| ||||||||||||||||||||||
Sbjct 1089559 TGCGTCTTTACTAGACGAAGGAACTGCAGCAGCAGAAGCAATG 1089601
Score = 136 bits (150), Expect = 5e-27
Identities = 273/398 (69%), Gaps = 14/398 (4%)
Strand=Plus/Plus
Query 154708 AAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCA 154767
||||||| | || |||| || | ||||| |||||||| || || || ||| | |
Sbjct 1090917 AAAGAAACATTTGCCTGATCCCCGTTTCAGCCCATGGAACCAACCCAGCATCTGCAGCAA 1090976
Query 154768 TGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAG 154827
|||| || |||||||| |||| || || ||| |||| ||||| | || | |||
Sbjct 1090977 TGGCTGGCATGAAAGTAGTAGCAGTTAAATGTCTTGATAATGGTTCATTGGATCTTGAAG 1091036
Query 154828 ATCTAGAGAAGAAAGC----AA--TCATGAATACATTTGAACTGTCATGTATTATGATTA 154881
|||| | ||||| || ||| || ||| ||| ||| | ||||||| |
Sbjct 1091037 ATCTTGCTGCTAAAGCTGAAAAGTTCAGTAA-ACAGTTGG-CTGC----TGTTATGATCA 1091090
Query 154882 CATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTT 154940
| || || ||||| ||||| | |||||| || || | | | | ||| | | || |||
Sbjct 1091091 CTTATCCTTCTACTTATGGTCTGTTTGAACCTGGTATCAAAGATGCTAT-TGATATTGTT 1091149
Query 154941 CATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTA 155000
||| | ||||||| || || ||||||||||| || ||| | ||||| || || || ||
Sbjct 1091150 CATAGCCATGGTGGCCAAGTCTATCTTGATGGTGCTAATATGAATGCTCAAGTTGGCTTA 1091209
Query 155001 GCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGT 155060
| || |||| || || ||||| |||||| | ||||| || || |||||||||
Sbjct 1091210 ACCTCGCCTGGTGATCTAGGGGCTGATGTTTGTCATTTGAACTTGCACAAGACATTCTGT 1091269
Query 155061 ATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098
||||| || || ||||| ||||| || || ||||| ||
Sbjct 1091270 ATTCCTCACGGCGGTGGTGGTCCCGGTGTTGGTCCAAT 1091307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212691397600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |