Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq2 170 2e-37
>seq2
Length=2234776
Score = 170 bits (188), Expect = 2e-37
Identities = 491/743 (66%), Gaps = 28/743 (4%)
Strand=Plus/Plus
Query 159046 TATCATAGTGAGACTGACATGATGAGATATATCTATGAGTTAGCATCAAAAGATTTCTCA 159105
||||||| || |||| |||| |||||||| | ||||| | ||| || ||||| ||
Sbjct 1090580 TATCATAACGAAACTGCCATGTTGAGATATTTACATGAGCTTCAATCTAAGGATTTATCT 1090639
Query 159106 TTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCAGCATCAGAA 159165
| | ||| | ||| |||| |||||| ||||||||||||||||| ||| | ||||
Sbjct 1090640 CTTGCTAATAGCATGATTCCTCTTGGTTCATGTACTATGAAACTAAATGCAACGGTAGAA 1090699
Query 159166 CTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTATGATACAG 159225
|||| || | | ||| || || ||| | |||||| | |||| ||
Sbjct 1090700 ATGATTCCGATCACTTGGCCTGAATTCAGCAACATTCATCCATTTGTTCCTAA-----AG 1090754
Query 159226 ACCATG-----GGTTATCAAAAAATTATAGATGACTTACAGAAATGGTTATGTGATATCA 159280
|||| | ||||| || | || | ||| | | ||| || ||||||||
Sbjct 1090755 ACCAAGCTGAAGGTTACTTGGAATTGATCGCTGAACTGGAAAAAGATCTAGCTGATATCA 1090814
Query 159281 CAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGAC 159340
| || |||||||| | || | || || | || | || ||||| || | ||
Sbjct 1090815 CTGGTTTTGATTCAACCTCGCTGATGCCGAATTCTGGTGCTCAAGGTGAATACACCGGTT 1090874
Query 159341 TGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATA-AAAGAAATGTATGTTTG 159399
| | | ||| || || | | | | ||| | | | ||||||| | || ||
Sbjct 1090875 TAAGAACCATCAGGGCTTATT-TGGATGCTAAGGGGGAAACAGAAAGAAACATTTGCCTG 1090933
Query 159400 ATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTT 159459
|| || | ||||| |||||||| || || ||||| |||| ||||| || ||||||||
Sbjct 1090934 ATCCCCGTTTCAGCCCATGGAACCAACCCAGCATCTGCAGCAATGGCTGGCATGAAAGTA 1090993
Query 159460 GTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGC- 159518
|||| || || ||| |||| |||| | || | ||||||| | |||||
Sbjct 1090994 GTAGCAGTTAAATGTCTTGATAATGGTTCATTGGATCTTGAAGATCTTGCTGCTAAAGCT 1091053
Query 159519 ---AA--TCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACAT 159573
|| ||| || ||| ||| ||| | ||||||| || ||||| ||||| ||
Sbjct 1091054 GAAAAGTTCAGTAA-ACAGTTGG-CTGC----TGTTATGATCACTTATCCTTCTACTTAT 1091107
Query 159574 GGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGTCA 159632
||| | |||||| | |||| | | | ||| | | ||||||||| ||||||| ||
Sbjct 1091108 GGTCTGTTTGAACCTGGTATCAAAGATGCTAT-TGATATTGTTCATAGCCATGGTGGCCA 1091166
Query 159633 GGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGA-CT 159691
|| |||||||||||||| ||| | ||||| || || || || | || |||| ||
Sbjct 1091167 AGTCTATCTTGATGGTGCTAATATGAATGCTCAAGTTGGCTTAACCTCGCCTGGTGATCT 1091226
Query 159692 ATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTG 159751
| || || ||||| |||||| | ||||| || ||||||||||||||||| || || ||||
Sbjct 1091227 A-GGGGCTGATGTTTGTCATTTGAACTTGCACAAGACATTCTGTATTCCTCACGGCGGTG 1091285
Query 159752 GAGGTCCTGGCGTAGGTCCTATT 159774
| ||||| || || ||||| |||
Sbjct 1091286 GTGGTCCCGGTGTTGGTCCAATT 1091308
Score = 134 bits (148), Expect = 2e-26
Identities = 182/251 (73%), Gaps = 6/251 (2%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
|| || |||||| |||| ||||| || || ||||| |||||||| |||||||| ||
Sbjct 1089956 CAGAGATTTGGTGTTCCAATGGGTTATGGTGGTCCACATGCTGCTTTCTTTGCTGTAAGC 1090015
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGA---ATTGTAGGTCAGTCAGTAGATAGCGAA 158559
| |||| || | || || ||||| ||| |||| ||||||| | |||||| |
Sbjct 1090016 AATAAGTTCAATCGTAAAATGCCTGGTAGACTAATTGG-GGTCAGTAA--AGATAGATTA 1090072
Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619
||| || || | ||||| || |||||||| | ||||||||||||| ||||| |||
Sbjct 1090073 GGTGATCCTGCTTTAAGATTGGCTTTACAGACTCGTGAGCAGCATATCAAGAGAGAAAAA 1090132
Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679
|| |||||||| || || || || ||||| | || || |||||| | || |||||
Sbjct 1090133 GCTACCAGTAATATTTGTACTGCTCAAGCTTTACTTGCCAATATGGCCGGTGCTTATGCT 1090192
Query 158680 GCATATCATGG 158690
| |||||||||
Sbjct 1090193 GTATATCATGG 1090203
Score = 127 bits (140), Expect = 2e-24
Identities = 162/223 (73%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 157881 TATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGA 157940
||| ||| |||| ||| ||| |||| ||||| |||| || | ||||| |||||||
Sbjct 1089379 TATTGGTAAAGGTTACASTGGTACCAATACACCTGCAGTTATCCTTAGAAACATTCTTGA 1089438
Query 157941 GAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATT 158000
|||| ||||||||||| || || || ||||| | || || ||||| || ||| |
Sbjct 1089439 ATGTCCTGAATGGTACACATCATATACACCTTATCAGCCAGAAATTTCTCAAGGTAGACT 1089498
Query 158001 GGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAA 158060
|| ||| |||| || || ||||| | | | || | || ||| |||| || || ||
Sbjct 1089499 TGAGGCTCTATTGAACTATCAAACTGTTGTTTCTGATTTGACTGGATTACCAATTGCTAA 1089558
Query 158061 CGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
|| ||| || |||| |||| ||||||||||||||||||||||
Sbjct 1089559 TGCGTCTTTACTAGACGAAGGAACTGCAGCAGCAGAAGCAATG 1089601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588051089740400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |