Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq4 159 8e-34
seq1 140 7e-28
>seq4
Length=1903616
Score = 159 bits (176), Expect = 8e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || || || || ||||| || ||||| || | ||| ||||| |||||||| | ||||
Sbjct 1735282 TGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTTCCATCTTCCAACTGC 1735341
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
||||| || ||||| | |||||||| ||||||||||| ||||||||||||||||| ||
Sbjct 1735342 TTACCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTA 1735401
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
|||||| || ||||||||||| ||| || || || || |||| ||||| || ||
Sbjct 1735402 GACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATAGTCTTACCCGTA 1735461
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | ||||||
Sbjct 1735462 AGGGTCTTAACGAAAATTTGCAT 1735484
>seq1
Length=2480924
Score = 140 bits (154), Expect = 7e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| | ||| || | || ||||| ||||| |||||||| ||||| || | | ||||||
Sbjct 1632701 GAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTTCT 1632760
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|| ||||| | |||||||| || ||||| | || ||||| ||||| ||||| |||||
Sbjct 1632761 TCCGTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTC 1632820
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||||||||| || ||||| || ||||| ||||| ||| ||| ||||| | |||
Sbjct 1632821 CTTGTCTTGAATCTTGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGT 1632880
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| ||||| || || || || || || ||
Sbjct 1632881 AATAGTCTTACCAGTTAAGGTCTTAACAAA 1632910
Score = 136 bits (150), Expect = 9e-27
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || || |||||||||||||| || | ||||||| || ||||| | ||||| ||
Sbjct 1873689 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCA 1873630
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| |||| ||| || ||||| ||||| ||||| ||||||||||| || ||||
Sbjct 1873629 GCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTG 1873570
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || ||||| ||||| || ||| ||||| | || | || || || ||||| ||
Sbjct 1873569 ACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARGTC 1873510
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 1873509 TTCACGAAAATTTGCAT 1873493
Score = 136 bits (150), Expect = 9e-27
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || || |||||||||||||| || | ||||||| || ||||| | ||||| ||
Sbjct 1873917 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCA 1873858
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| |||| ||| || ||||| ||||| ||||| ||||||||||| || ||||
Sbjct 1873857 GCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTG 1873798
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || ||||| ||||| || ||| ||||| | || | || || || ||||| ||
Sbjct 1873797 ACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARGTC 1873738
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 1873737 TTCACGAAAATTTGCAT 1873721
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || || |||||||||||||| || | ||||||| || ||||| | ||||| ||
Sbjct 1874145 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCA 1874086
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| |||| ||| || ||||| ||||| ||||| ||||||||||| || ||||
Sbjct 1874085 GCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTG 1874026
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || ||||| ||||| || ||| ||||| | || | || || || ||||| ||
Sbjct 1874025 ACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAAGGTC 1873966
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 1873965 TTCACGAAAATTTGCAT 1873949
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || || |||||||||||||| || | ||||||| || ||||| | ||||| ||
Sbjct 1873461 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCA 1873402
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| ||||| |||| ||| || ||||| ||||| ||||| ||||||||||| || ||||
Sbjct 1873401 GCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTG 1873342
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || ||||| ||||| || ||| ||||| | || | || || || ||||| ||
Sbjct 1873341 ACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAAGGTC 1873282
Query 195124 TTTACGAACACTTGCAT 195140
|| || || | |||||
Sbjct 1873281 TTAACAAAGATCTGCAT 1873265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481386771505
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |