Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 1e-13
>seq1
Length=2480924
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| ||||| || | ||| ||| || ||||| || |||||||| || ||||| | ||
Sbjct 1873476 AACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCT 1873417
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|| | || ||||| ||||| || |||| |||||| ||| | || | || ||||||||
Sbjct 1873416 TCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCT 1873357
Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
|||||| ||||| | || | || | ||||| || | || ||||||
Sbjct 1873356 TGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTT 1873297
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| || || | ||||| |||||||||||||| ||
Sbjct 1873296 TTACCAGTCAAGGTCTTAACAAAGATCTGCATGTT 1873262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633540652920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |