Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq2 259 6e-64 >seq2 Length=2234776 Score = 259 bits (286), Expect = 6e-64 Identities = 604/904 (67%), Gaps = 23/904 (3%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||||| || ||||| ||||||| ||||| || || || | Sbjct 2161583 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGC 2161524 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA 36991 | || ||||||||||| || ||||||||||| || | || || | || | || Sbjct 2161523 CAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAAC----CTTCTTGT 2161468 Query 36992 T----AATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCAT 37047 | || | || | ||||| ||||||||||| | || | |||||| || | Sbjct 2161467 TGCCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGC 2161408 Query 37048 AGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGT--TTTTCTATTAT 37105 |||| ||||| | || || || | ||||| | ||| ||| ||||| ||| Sbjct 2161407 AGTTCATACCTAATAAAGAGACAGGCAAAGCATC--GGTGAAGTAGCCCTTTTCGATTTC 2161350 Query 37106 TACAGCATCTTTAACTATATT---AACAATAACTTCTTCAGTTGGGGGATATTTTAAATA 37162 ||||| || ||| || || ||||||||| | |||| | | | || |||| Sbjct 2161349 GACAGCTTCAGTAATGATCTTTTCAACAATAACAGCGTCAGGTCTG---TTGTTCAAATG 2161293 Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 || || || || ||||| ||| |||||||||||||||||| | |||||||| || Sbjct 2161292 AGAGAATAACAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTT 2161233 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||| || || | || |||||||||||||| || || | ||| || || | ||||| || Sbjct 2161232 AGAGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGA 2161173 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342 || || ||||||||||||||||| || ||||| || || | | | ||| || || Sbjct 2161172 GCCCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGC 2161113 Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402 || ||| |||||| | | ||| || |||||| ||| | ||| ||| | Sbjct 2161112 TTCATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTT 2161053 Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462 |||||| || || || | | | | | ||| | | || | |||||||||||||| || Sbjct 2161052 TTCAATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAG 2160993 Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522 ||| || |||||||||| || ||||| || || || |||||||| || ||| | Sbjct 2160992 TAAGGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTT 2160933 Query 37523 AGCTTCAGATAATTGAACATC-GTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581 ||||||| | |||||| || | | | || | || |||| ||||||||||| || | Sbjct 2160932 GGCTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTA-CTAAATTTTCATTAACAATAC 2160874 Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTG 37638 ||||| || ||||||||||| | || | |||||| ||||||| ||||| Sbjct 2160873 CATCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCATTGTCATTCA 2160814 Query 37639 ATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAAC 37698 | |||| |||||||| || ||| ||| ||| |||| || || | ||||| || Sbjct 2160813 AACGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGG 2160754 Query 37699 TTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAA 37758 || || |||||||| ||| || |||| || || ||||| || | |||| Sbjct 2160753 AAGCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAA 2160694 Query 37759 ATCT 37762 |||| Sbjct 2160693 ATCT 2160690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316688940600