Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq11 255 3e-63
seq5 233 1e-56
>seq11
Length=408711
Score = 255 bits (282), Expect = 3e-63
Identities = 437/631 (69%), Gaps = 19/631 (3%)
Strand=Plus/Plus
Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957
||||||||||| ||| |||| |||||||||| |||||||| || || ||||| | |
Sbjct 180813 AATAAATGCCAGTCATCATTGCTTTCAACTTTCTTCATAAATAGGTCGGGTATCCATAAT 180872
Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017
||||| || | || | ||||| | |||||||| || ||||| ||| ||| || | |
Sbjct 180873 GCATAGAAGAGGTCACGAGCTCTTAACTCTTCTTTACCATGATTTTTTCTTAAGTCAAGG 180932
Query 26018 AAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTT 26077
|| || || ||||| ||||||||||| | || || |||||| || ||||||
Sbjct 180933 AATTCGAATATATCATTATGCCATGGTTCAAGGTATATTGCAAAAGCGCCCGGTCTTTTG 180992
Query 26078 CCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT 26137
||| |||||||| |||||||| ||||| | |||||||||| |||||| ||||||||
Sbjct 180993 TTTCCCCCTTGATCAACGTATCTAGCAGTGTTATTGAAAACTCGCAACATGGGAACTAAC 181052
Query 26138 CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCA 26197
||| | || ||||| || | || | ||| ||| | |||||||||| ||| ||
Sbjct 181053 CCATTCGAGGTACCGTTAGTTCCTCTTATGTAGGAACCTCTAGATCTAATATTATGAACA 181112
Query 26198 TGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAA 26257
| || ||||||||||| | || || ||| ||||||||||| | ||| | | |
Sbjct 181113 CTTAAGCCTATTCCACCAGCGAACTTGGAGATACTTGCACAATCTGCCAATGTCTTGTAT 181172
Query 26258 ATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGA 26317
|||||| | || |||| | ||| | || | |||||| || || ||||||| |
Sbjct 181173 ATTCCTGTGATAGAATCATCCGACATGGCCAAGAGAAAACAGGATGACAATTGCGGGAAA 181232
Query 26318 GTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATA--TCCTTCACTCAAAG 26375
| |||||||||||||||||||| || ||||||||| || | || || | || ||
Sbjct 181233 ATGGTTCCTGAATTAAATAATGTTGGAGTAGCATGAATAAAGTACCTCTTGGACATTAAC 181292
Query 26376 CTGTATAAGTTTCAA----GAACTTC--ATCGATATTGTAATTACTAACTTCAATAGCTG 26429
|||| ||||||| ||||| ||| |||| | | ||||||||
Sbjct 181293 TCGTAT--GTTTCAAAGGCAGACTTCAAATCCTCTTTGTGTATGC------CAATAGCTA 181344
Query 26430 TTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCAAAT 26489
||| | | |||||||||| ||| ||| || | | ||| | ||| | | | ||| |
Sbjct 181345 CTCTCATCAACATATATTGRGGTGTTTC---TATAATTTTTCCTTCATATTTCAGCAAGT 181401
Query 26490 AAGATTTTTCTAAAGTTTTCAATCCAAAATA 26520
| |||||||| | |||||| || || || ||
Sbjct 181402 ATGATTTTTCCAGAGTTTTGAACCCGAAGTA 181432
>seq5
Length=1485630
Score = 233 bits (258), Expect = 1e-56
Identities = 432/624 (69%), Gaps = 21/624 (3%)
Strand=Plus/Minus
Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980
||||||| ||| |||||||||||| |||||| | ||| |||||||||||| |||||
Sbjct 766398 CTCAACTCTCTTCATAAATAAATCACTAATCCATAAGGCAACAAATAAATCTCTGGCTCT 766339
Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040
|||||||||||||||||||||||| | | || | ||||||||| ||||| | |||||
Sbjct 766338 GATTTCTTCTTTTCCGTGATTCTTTCTCACGTCAATGAAATCAAAGATATCAGGATGCCA 766279
Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100
|||||||| || | ||| ||| ||| | ||| |||||||| || || |||||
Sbjct 766278 AGGTTCTAAGTATAAAGCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCCACATATCT 766219
Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGC 26159
||||| | |||||||| || ||| || | |||| ||| | || |||||| || |
Sbjct 766218 AGCAGTGTTGTTGAAAACACGCATCATGGGGA-TAATACCATTAGATGTTCCGTTAGTAC 766160
Query 26160 TATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCC 26219
| ||| | || || || |||||||||| || ||| | ||| || ||||||||
Sbjct 766159 CAGCAATATAAGAACCAGTTGATCTAATATTATGGATATGTAAACCAATACCACCAGCAG 766100
Query 26220 ATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTT 26279
|| ||||| |||||| | || |||||| |||| |||| || ||| | |
Sbjct 766099 TCTTGGAAATCAATGCACATGTTTTAAGAGTATCGTAAATGCCTTCAATTGAATCTTCCT 766040
Query 26280 TCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATG 26339
|||| | | || ||||||||||| | ||| | |||| ||| || | |||||| || |
Sbjct 766039 TCATGGCAACCAAGAAACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTAAACAAAG 765980
Query 26340 TCGGTGTAGCATGAGTATAATATCCTTCA-----CTCAAAGCTGTATAAGTTTCAAGAAC 26394
| |||| |||||||| |||| ||||| ||||| ||||||||| | |||
Sbjct 765979 TAGGTGATGCATGAGTGAAATA--CTTCAAAGACATCAAA---TTATAAGTTTTGATAAC 765925
Query 26395 TTCATCGAT---ATTGTAATTACTAACTTCAATAGCTGTTCTTAACCACATATATTGAGG 26451
| ||| || || | || | || ||| ||| ||| | ||| | || ||
Sbjct 765924 ATTATCAATGTCATCGCCATGAATA---CCAACAGCAACTCTCATAATCATGTGCTGGGG 765868
Query 26452 TCGTTCAATTACATTATTTTCCGCATCTCTAATCAAATAAGATTTTTCTAAAGTTTTCAA 26511
|| |||| || || || | ||| |||| ||||||||| ||||| ||||| ||
Sbjct 765867 TCTTTCAGCGACTTTGCCATCTAC-TCT-TAAT-AAATAAGATCGCTCTAATGTTTTGAA 765811
Query 26512 TCCAAAATAATCATGATTGAAATC 26535
||||| |||| || ||||||||
Sbjct 765810 ACCAAAGTAATTATAGTTGAAATC 765787
Score = 116 bits (128), Expect = 2e-21
Identities = 344/522 (66%), Gaps = 14/522 (3%)
Strand=Plus/Minus
Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724
||||| || |||||| | |||||| || |||||| | ||| ||||| ||||| || |
Sbjct 767630 GTAAACTGAATAGCTGCTGCTGCTGCTTGAGTTCTCAAATAGTACATACCAGTCTTAAGA 767571
Query 24725 TTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAA 24784
||| ||||||||||| |||||||| | || || ||| ||| ||| | | ||||
Sbjct 767570 CCCTTTTTCCAACCGTAGAAATGCATAGCAGTAAGCTTTTTCATGGTTGGTTCT-CTAAT 767512
Query 24785 A-ACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAAT 24843
| | ||||| || || | ||| || || | ||| || ||||| | |||||
Sbjct 767511 GTAGATATTCATTGACTGTGATTGATCAATGAATGGACCTCTGTCAGCAGCCATATCAAT 767452
Query 24844 GATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAAT 24903
|| |||| |||| || | | |||||||| || || | || |||||||
Sbjct 767451 AATGACTTTCTGAGATAATTCCCATGTAGTTTTGTACAATTCCTTCAATTCCTTTGGAAT 767392
Query 24904 ACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCT-CATATTCGGTG 24962
||| ||||||||||| || ||||| || | ||| | ||| ||||
Sbjct 767391 GTTTGTAATATTTTGAATAGAGCCATTATCAG-CGATAATCTTGTTCTTCATAGAATCAT 767333
Query 24963 TCCAAAGATTAATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTC 25022
||||| | || |||| || ||| || | ||| | || |||||| |
Sbjct 767332 CCCAAATGCCCAATTCAACAAGGTCCTTAAGTAACCATGGATTAACAATTTGAAATTCAC 767273
Query 25023 CAGACAAAACTCTTCTTA--TTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATT 25080
||| |||||||||||| | |||| || ||||| ||||||| |||||||||||
Sbjct 767272 CAGCCAAAACTCTTCTAGAGTAGATA--TTAGAAGTATATGGTTCGAAACATTCATTGAA 767215
Query 25081 TCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAA 25140
|| | ||||||||||||||||| |||||||| || | ||| || || ||||| |
Sbjct 767214 ACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACTAAAAGAGAGTTTCTAAT 767155
Query 25141 ACCATATTTAACAATCTCTTGT---TTTAATTTATCCCAATC 25179
|||| ||| ||| ||||| || || |||||||||
Sbjct 767154 TCCATGCTTAGCAA---CTTGTCTCTTCAAAGAATCCCAATC 767116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039953741125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |