Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 172 6e-38 >seq2 Length=2234776 Score = 172 bits (190), Expect = 6e-38 Identities = 499/756 (66%), Gaps = 28/756 (4%) Strand=Plus/Minus Query 138188 AATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATT 138247 ||| ||||| || || ||||| ||||| || || ||||||||||||||||| || || || Sbjct 1091308 AATTGGACCAACACCGGGACCACCACCGCCGTGAGGAATACAGAATGTCTTGTGCAAGTT 1091249 Query 138248 TAGATGACATACATCTGCACCATAG-TCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306 | |||||| ||||| || || ||| |||| || | || || || || ||||| | Sbjct 1091248 CAAATGACAAACATCAGC-CCCTAGATCACCAGGCGAGGTTAAGCCAACTTGAGCATTCA 1091190 Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGT 138365 ||| |||||||| ||||| || || ||||||| | |||||| || | | ||| | | | Sbjct 1091189 TATTAGCACCATCAAGATAGACTTGGCCACCATGGCTATGAACAATATCA-ATAGCATCT 1091131 Query 138366 CTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGT 138425 |||| | |||||| | ||||| ||| || ||||| || |||||| ||| || Sbjct 1091130 TTGATACCAGGTTCAAACAGACCATAAGTAGAAGGATAAGTGATCATA--ACAGCAG--- 1091076 Query 138426 TCAAATGTATTCATGA--TT----GCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA 138479 ||| ||| || ||| || ||||| | ||||||| | || | ||| Sbjct 1091075 CCAACTGT-TTACTGAACTTTTCAGCTTTAGCAGCAAGATCTTCAAGATCCAATGAACCA 1091017 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | |||| ||| || || |||| |||||||| || ||||| ||||| || || || Sbjct 1091016 TTATCAAGACATTTAACTGCTACTACTTTCATGCCAGCCATTGCTGCAGATGCTGGGTTG 1090957 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTT-TATCATCTCCTGATCCTTG 138598 |||||||| ||||| | || ||||| || | ||||||| | | | ||| | | | Sbjct 1090956 GTTCCATGGGCTGAAACGGGGATCAGGCAAATGTTTCTTTCTGTTTCCCCCTTAGCATCC 1090897 Query 138599 ATGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTG 138658 | ||| || ||| | | | || | || ||||| || | || | || || Sbjct 1090896 A-AATAAGCCCTGATGGTTCTTAAACCGGTGTATTCACCTTGAGCACCAGAATTCGGCAT 1090838 Query 138659 TAATGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAGTCATCTATTAT 138718 | || | ||||||||||| ||||||||| || ||| | | ||| | || | Sbjct 1090837 CAGCGAGGTTGAATCAAAACCAGTGATATCAGCTAGATCTTTTTCCAGTTCAGCGATCAA 1090778 Query 138719 CTTTTGATAACC-----CATGGTCTGTATCATAGGTGTATGTGGATGCACGTTGGCAAAT 138773 | ||||| | |||||| |||| | |||||| | |||| ||| Sbjct 1090777 TTCCAAGTAACCTTCAGCTTGGTCT-----TTAGGAACAAATGGATGAATGTTGCTGAAT 1090723 Query 138774 TCTTCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAACTACCA 138833 || ||| | | || |||| |||| | | ||||||||||||||| || || |||| Sbjct 1090722 TCAGGCCAAGTGATCGGAATCATTTCTACCGTTGCATTTAGTTTCATAGTACATGAACCA 1090663 Query 138834 AGTGGAACCATACCATTTACTAATGAGAAATCTTTAGAGCATAACTCATAGATATATCTC 138893 || |||| ||| | ||| | | || ||||| ||||| | ||||| | ||||||| Sbjct 1090662 AGAGGAATCATGCTATTAGCAAGAGATAAATCCTTAGATTGAAGCTCATGTAAATATCTC 1090603 Query 138894 ATCATGTCAGTTTCACTGTGATACTTATTGAATACT 138929 | |||| ||||||| | ||||| ||||| ||| Sbjct 1090602 AACATGGCAGTTTCGTTATGATAGGAGTTGAAAACT 1090567 Score = 136 bits (150), Expect = 5e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| ||||||||||||||| |||| |||| || ||| || || || ||||||||||| Sbjct 1089601 CATTGCTTCTGCTGCTGCAGTTCCTTCGTCTAGTAAAGACGCATTAGCAATTGGTAATCC 1089542 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 || | || | | | ||||| || || |||| ||| || | ||| || ||||| || Sbjct 1089541 AGTCAAATCAGAAACAACAGTTTGATAGTTCAATAGAGCCTCAAGTCTACCTTGAGAAAT 1089482 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 || | ||||| || || || ||||||||||| |||| ||||||| ||||| | Sbjct 1089481 TTCTGGCTGATAAGGTGTATATGATGTGTACCATTCAGGACATTCAAGAATGTTTCTAAG 1089422 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATA 140081 || |||| |||||| |||| ||| ||| |||| ||| ||| Sbjct 1089421 GATAACTGCAGGTGTATTGGTACCASTGTAACCTTTACCAATA 1089379 Score = 129 bits (142), Expect = 7e-25 Identities = 194/273 (71%), Gaps = 6/273 (2%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||||||| | ||||| || | |||||| || || | ||||| || || || || Sbjct 1090203 CCATGATATACAGCATAAGCACCGGCCATATTGGCAAGTAAAGCTTGAGCAGTACAAATA 1090144 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 |||||||| ||||| ||||| | ||||||||||| | ||| |||| || ||||| | Sbjct 1090143 TTACTGGTAGCTTTTTCTCTCTTGATATGCTGCTCACGAGTCTGTAAAGCCAATCTTAAA 1090084 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAAT---TCTGCCAGGTATCTTTCTC 139448 ||||||| ||| || || | ||||||| |||| ||| ||||| || || | Sbjct 1090083 GCAGGATCACCTAATCTATC--TTTACTGACC-CCAATTAGTCTACCAGGCATTTTACGA 1090027 Query 139449 TTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATA 139508 || |||| | || |||||||| |||||||| ||||| || || ||||| |||| | Sbjct 1090026 TTGAACTTATTGCTTACAGCAAAGAAAGCAGCATGTGGACCACCATAACCCATTGGAACA 1089967 Query 139509 CCAAACCTTTGCATACTACCTACAGCAATATCA 139541 ||||| || || | |||| ||||||||| Sbjct 1089966 CCAAATCTCTGAGCAGATCCTAAGGCAATATCA 1089934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998291437800