Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 203 4e-47 seq11 82.4 9e-11 >seq5 Length=1485630 Score = 203 bits (224), Expect = 4e-47 Identities = 1154/1816 (64%), Gaps = 57/1816 (3%) Strand=Plus/Plus Query 75145 TTACTTTGGTCTCAAAACCCTTGAGAAGAGCT-ATCTTCAACGGCTCGATGGCATCCTCA 75203 |||||||||| ||||||| | ||| || || || | | | | ||||||| || Sbjct 765801 TTACTTTGGTTTCAAAACATTAGAGC-GATCTTATTTATTAAGAGTAGATGGCAAAGTCG 765859 Query 75204 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTG 75263 |||| || ||| ||||| | ||| | || || | || || || || || ||||||| Sbjct 765860 CTGAAAGACCCCAGCACATGATTATGAGAGTTGCTGTTGGTATTCATGGCGATGACATTG 765919 Query 75264 ATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCA 75322 || ||| | | || || | |||||| | |||| |||| ||| ||| |||| Sbjct 765920 ATAATGTTATCAAAACTTATAATTTGATGTCTTTGAAGTAT-TTCACTCATGCATCACCT 765978 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 || | || |||||||||||||| ||| || ||||| ||| ||| | | |||| Sbjct 765979 ACTTTGTTTAATGCTGGTACACCTCAACCTCAAATGTCTTCTTGTTTCTTGGTTGCCATG 766038 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||| || ||||| | || || || | ||||||| ||||| || || ||| Sbjct 766039 AAGGAAGATTCAATTGAAGGCATTTACGATACTCTTAAAACATGTGCATTGATTTCCAAG 766098 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 ||||| |||||||| | || |||||| || | ||| | | | ||| |||| Sbjct 766099 ACTGCTGGTGGTATTGGTTTACATATCCATAATATTAGATCAACTGGTTCTTATATTGCT 766158 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || || || ||| |||||||||| || ||| | || || || ||| ||| || Sbjct 766159 GGTACTAACGGAACATCTAATGGTATTATCCCCATGATGCGTGTTTTCAACAACACTGCT 766218 Query 75563 CGCTATGTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 | ||||| | |||| || | ||| || | |||| | ||||| ||||| Sbjct 766219 AGATATGTGGACCAAGGTGGTAATAAACGCCCTGGTGCTTTCGCTTTATACTTAGAACCT 766278 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 |||||| | |||||| | || ||| |||| | || || || || | ||||| | Sbjct 766279 TGGCATCCTGATATCTTTGATTTCATTGACGTGAGAAAGAATCACGGAAAAGAAGA-AAT 766337 Query 75680 CGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 | | | |||||| | ||| || | |||||| || | || |||||| | ||||| Sbjct 766338 CAGAGCCAGAGATTTATTTGTTGCCTTATGGATTAGTGATTTATTTATGAAGAGAGTTGA 766397 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGT 75798 || || ||| | |||||| | || | || | | || |||||| | || || Sbjct 766398 GGCTGGCGGTGATTGGTCTTTCTTTTCACCTAATGAAGCTCCAGGTTTATCTGATTGTTA 766457 Query 75799 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGAC 75858 ||| | || |||||||| | || || |||||| || || ||||| || Sbjct 766458 CGGTAAAGAATTTGAAGCTTTGTATGAAAGATATGAACGTGAAGGAAGAGCTGTAAGAAC 766517 Query 75859 TGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 || ||| | ||||| | ||||| | || | || || || ||||| || Sbjct 766518 AGTGAAAGCTCAAAAACTTTGGTACTCTATTTTGGAAGCTCAAACTGAAACTGGTGTCCC 766577 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 || |||||||| ||||| |||||||| ||||| || ||||||||| | || || Sbjct 766578 ATTCATGCTTTATAAGGACGCTTGTAATGAGAAGTCCAATCAAAAGAATCTTGGTGTCAT 766637 Query 75979 CAAGAGCTCA---AATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||| ||| ||| | ||| |||||| | || ||| | | ||||| || Sbjct 766638 CAA---ATCAAGTAATTTATGCTGTGAAATTGTTGAATACTCTTCTCCTGATGAAGTTGC 766694 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACT-CGCACTT 76094 ||| || |||||||| || | || | || | | ||| | || || | | | | Sbjct 766695 TGTATGTAATTTGGCTTCTCTTGCTTTACCTACTTTTGTTACTGGTGATAGTAAGAAGGG 766754 Query 76095 TT-----GATTATGAAAAACTTCATGAAATCACAAAG--ATTGTTACCAAAAATCTAAAC 76147 || |||| ||| ||| | |||||| |||| ||| ||| | | | ||| | ||| Sbjct 766755 TTGGTACGATTTTGAGAAATTACATGAAGTCACTAAGGTCTTGGTTC--ATAATTTGAAC 766812 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTG-CGCGAA--AGTCTAATATGCGA 76204 | ||||||| ||||||| |||||| ||| ||| || || | || || | | || Sbjct 766813 AAAATCATTGATAGAAATTATTATCCTGTT---CCTGAGGCCAAGTACTCCAACAAGAGA 766869 Query 76205 CACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTAC 76264 | || ||||||| | | ||||| |||||||| | |||| ||||| | | | Sbjct 766870 AATAGGCCTATTGCTATTGGTGTCCAAGGTCTTTCTGATGCCTTTATGGCATTAAGATTG 766929 Query 76265 GCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCAC 76324 ||||||||||| |||||| || | ||||| | ||||||||||| || || || Sbjct 766930 CCATTTGATTCACCTGAAGCTAAACAATTGAATATCCAGATCTTTGAAACTATTTACCAT 766989 Query 76325 GCATCCCTGGAGGC--GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382 || | | || || ||| ||| ||||| || |||| | ||| | || | | Sbjct 766990 GCTGCAGTTGAAGCCTCAGT--TGACTTGGCCAAAATTGAAGGACCTTATCAAACTTATA 767047 Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTT-CAGTTTGATATGTGGGAAGGTGAAACCAAG 76441 | || || || | | ||||| || || |||||| | |||| | ||||||| Sbjct 767048 AAACATCGCCAGC-TGCTAAGGGTCAATTACAATTTGATCTTTGGG-GTATTAAACCAA- 767104 Query 76442 CTCAACTA--CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 76499 || | || || |||||| | | ||| || | || | || || | ||| Sbjct 767105 CTGATTTATGGGATTGGGATTCTTTGAAGAGACAAGTTGCTAAGCATGGAATTAGAAACT 767164 Query 76500 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 76559 |||||| | || || |||||||| || || || | ||||| | ||| ||||||| Sbjct 767165 CTCTTTTAGTTGCTCCTATGCCAACTGCATCTACTTCTCAAATTCTTGGTTTCAATGAAT 767224 Query 76560 GCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCA 76619 | || |||||||| || | || |||||| |||||| | || ||||| ||| | Sbjct 767225 GTTTCGAACCATATACTTCTAATATCTACTCTAGAAGAGTTTTGGCTGGTGAATTTCAAA 767284 Query 76620 TTGTCAA--CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTC-TCTGGTCCAAGGATA 76676 |||| || || | | | || ||||| | ||||| | | ||| | || Sbjct 767285 TTGTTAATCCATG--GTTACTTAAGGACCTTGTTGA-ATTGGGCATTTGGGATGATTCTA 767341 Query 76677 TGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATATCTCAGATATCCCAG 76733 ||||| | || | | | || | ||| || ||||||||||| || | || ||| Sbjct 767342 TGAAGAA---CAAGATTATCGCTGATAATGGCTCTATTCAAAATATTACAAACATTCCAA 767398 Query 76734 ATGATATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACA 76793 | || | ||| | | ||| || |||||| | ||||| | ||||| | Sbjct 767399 AGGAATTGAAGGAATTGTACAAAACTACATGGGAATTATCTCAGAAAGTCATTATTGATA 767458 Query 76794 TGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGA 76851 |||| || || | |||| |||||||||||| ||| ||| |||||| | | ||| Sbjct 767459 TGGCTGCTGACAGAGGTCCATTCATTGATCAA--TCACAGTCAATGAATATCTACATTAG 767516 Query 76852 AAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAA 76911 | ||||| ||| ||||| || |||||||| | |||| |||||| |||| || || Sbjct 767517 AGAACCAACCATGAAAAAGCTTACTGCTATGCATTTCTACGGTTGGAAAAAGGGTCTTAA 767576 Query 76912 AACCGGAATGTACTAT 76927 || || ||||||||| Sbjct 767577 GACTGGTATGTACTAT 767592 >seq11 Length=408711 Score = 82.4 bits (90), Expect = 9e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 76787 ATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTC 76846 ||||| ||||| || ||| | || |||||||||||| ||||| |||||| | ||| Sbjct 179776 ATTGATATGGCAGCTGATAGAGGAGCATTCATTGATCAATCCCAAAGCATGAATATTTTC 179717 Query 76847 ATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGG 76906 |||| | || || ||| ||||| | | |||||| | |||| |||||| | || Sbjct 179716 ATGGCAGAGCCCACCATGCGAAAGCTTACGACGATGCATTTCTACGGTTGGAAAAAAGGA 179657 Query 76907 CTCAAAACCGGAATGTACTATCTCCGATCAAAGGC 76941 | || ||||||||||| |||||| || | |||| Sbjct 179656 TTAAAGACCGGAATGTATTATCTCAGAACTGAGGC 179622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569488143200