Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 3e-25
seq4 116 7e-21
>seq1
Length=2480924
Score = 131 bits (144), Expect = 3e-25
Identities = 173/240 (72%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| ||||||||||| | || | |||| ||| ||||| | || || ||||||
Sbjct 1873501 AATTTGCATACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATT 1873442
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| |||| |||| || |||||||| ||||| ||||| || | ||| || ||
Sbjct 1873441 GTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTG 1873382
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || ||||| || ||||| || || | || | ||| |||||| || ||
Sbjct 1873381 ATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGA 1873322
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| |||||||||| || || |||||||| || | || || ||||| || ||||| ||
Sbjct 1873321 TGATTCAACTTCTAATGTGATGGTTTTACCAGTCAAGGTCTTAACAAAGATCTGCATGTT 1873262
Score = 131 bits (144), Expect = 3e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| ||||||||||| | || | |||| ||| ||||| | || || ||||||
Sbjct 1873729 AATTTGCATACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATT 1873670
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| |||| |||| || |||||||| ||||| ||||| || | ||| || ||
Sbjct 1873669 GTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTG 1873610
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || ||||| || ||||| || || | || | ||| |||||| || ||
Sbjct 1873609 ATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGA 1873550
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||||| || || |||||||| || | || || || || ||||||||
Sbjct 1873549 TGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873493
Score = 131 bits (144), Expect = 3e-25
Identities = 171/237 (72%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183
||||| ||||||||||| | || | |||| ||| ||||| | || || ||||||
Sbjct 1873957 AATTTGCATACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATT 1873898
Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243
||||| |||| |||| || |||||||| ||||| ||||| || | ||| || ||
Sbjct 1873897 GTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTG 1873838
Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303
||| || || || ||||| || ||||| || || | || | ||| |||||| || ||
Sbjct 1873837 ATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGA 1873778
Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||||| || || |||||||| || | || || || || ||||||||
Sbjct 1873777 TGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873721
>seq4
Length=1903616
Score = 116 bits (128), Expect = 7e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||| || | ||||| ||| || || || || || ||||| || || |
Sbjct 1735303 ATGTTGTAGTCAGAAAGGGTTCTTCCATCTTCCAACTGCTTACCAGCAAAGATCAAACGT 1735362
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|||||||| ||||| ||||||||||| ||||| || || | || | ||| ||| ||
Sbjct 1735363 TGTTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTG 1735422
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| ||||||||||| || ||||| ||||| ||||| || || || || || || ||||||
Sbjct 1735423 TCTGAAGACTCAACCTCGAGAGTAATAGTCTTACCCGTAAGGGTCTTAACGAAAATTTGC 1735482
Query 193359 AT 193360
||
Sbjct 1735483 AT 1735484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654231314800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |