Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq2 226 4e-54
seq1 123 4e-23
>seq2
Length=2234776
Score = 226 bits (250), Expect = 4e-54
Identities = 604/906 (67%), Gaps = 20/906 (2%)
Strand=Plus/Minus
Query 17879 ACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATAAAATCAAAT 17938
||| | || ||||||||||| || || || |||| || || | ||| || ||||||
Sbjct 2161555 ACTCTCTTTTCGAAGAAATTAGTTTTACCAGCCAAAGAGATATTTTCCATGAAGTCAAAT 2161496
Query 17939 GGATTAGTGGTTTTATAATATTT-TTCTTGTATTAATTCGTATAATAATCTATCTGCTAC 17997
||||| | | || ||| || || ||| || | | |||||||||||| ||
Sbjct 2161495 GGATTGGAAGAGTTGTAAACCTTCTTGTTGCCCAAAGCAAGA-AGTAATCTATCTGCAAC 2161437
Query 17998 AAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAGTCTGAAAGGTAGAGC 18057
|||||| ||||| || |||| | | ||| |||||||||| || || ||| | |||
Sbjct 2161436 AAATTCAACATACTGACACATGAGCTTGCAGTTCATACCTAATAAAGAGACAGGCAAAGC 2161377
Query 18058 ATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATTATGTTTATTACCCTAGA 18117
||| | | | | || || || || |||| || | || || ||| || || |
Sbjct 2161376 ATCGGTGAAGTAGCCCTTTTCGATTTCGACAGCTTCAGTAATGATCTTTTCAACAATA-A 2161318
Query 18118 TTTTGGCAATT-TATTAATTATGTGATTATAATATAATAAACACGCAAAATCAGTGTGTA 18176
| || | | || | | ||| | |||| || || ||||| ||||| ||||
Sbjct 2161317 CAGCGTCAGGTCTGTTGTTCAAATGAG---AGAATAACAAGCAAGCAAAGTCAGTATGTA 2161261
Query 18177 AACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCttt 18236
|||||||||||||| | || ||||||||| || || | || ||||||| |||||| |
Sbjct 2161260 AACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGTGAGACCAGGCATTAAACCTCTCT 2161201
Query 18237 tttttAGCCAAAATATCGATGCGAAACTA-CTAGAAAAGAATATACCCTCAAC-GCACGC 18294
| || ||||| || || || || |||| | | || ||||| ||||| ||||| ||| ||
Sbjct 2161200 TCTTGAGCCAGAAGATAGAAGC-AAACGAGCCCGAGAAGAAAATACCTTCAACAGCA-GC 2161143
Query 18295 GAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTGCTCAGT-ATCCATTTTTGTGCC 18352
|| || | |||||||||| |||| | || || || | ||| | |||||| | |||
Sbjct 2161142 AAAGGCAACTAATCTTTCACCAAACAATG-CTTCATCG-TCATTGATCCATCGTAAAGCC 2161085
Query 18353 CATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCTTTT 18412
||||| | | || || || || | || |||||||| || |||| |||| |
Sbjct 2161084 CATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCAATAGCATTGAATAAATAATCTGCT 2161025
Query 18413 TCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTT 18472
|| || | || || |||||||| || || | || || || ||||||| || ||| ||
Sbjct 2161024 TCCTTTGTGTCCTTGATATAAGTATCAATCAGTAAGGAGTAAGTTTCAGAGTGGATGTTT 2160965
Query 18473 TCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTC-GCTATA 18531
||||| || || |||| ||| || | | || || ||| ||||| || ||| |
Sbjct 2160964 TCCATCATGATTTGGAAACCATAGAAGCACTTGGCTTCAGGAAGTTGAACTTCAGCT-GA 2160906
Query 18532 AAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAAC 18591
|| ||||||| ||||| |||||||| ||||| |||| | || || || || || ||
Sbjct 2160905 GAAGTTTTCTACTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAAAGCTAAGAC 2160846
Query 18592 ATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCCATTCATCTATATCTTT 18648
| ||| ||| | ||||||| || || | | || | ||| |||| | ||| ||
Sbjct 2160845 TCTTGAAATAAAAAATCTTTCATTGTCATTCAAACGGTTTTCCCAATCATGAACATCCTT 2160786
Query 18649 TGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTTTATA 18708
| || |||| ||||| | ||||| || || | ||| || | || ||||||| |
Sbjct 2160785 TCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAGCTTCAGCTTTCTTATACATTTGCCA 2160726
Query 18709 AATATCTTCATGTTGTATAGGAAATAATATATATCGTTTATAATTTTTTATTAACATAGG 18768
|| || | || || || || || | | | ||| ||||| |||| |||||| ||
Sbjct 2160725 GATTTCATGATATTTAATTGGGAAAAGAACAAATCTTTTATCGTTTTCCTTTAACAAGGG 2160666
Query 18769 TTCTTC 18774
||| ||
Sbjct 2160665 TTCGTC 2160660
>seq1
Length=2480924
Score = 123 bits (136), Expect = 4e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| ||||| || ||| |||| || |||||||| ||||| || ||||||||||| |||
Sbjct 1873262 AACATGCAGATCTTTGTTAAGACCTTGACTGGTAAAACCATCACATTAGAAGTTGAATCA 1873321
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| || | |||| || || || | ||| || ||||| || ||||| || || |||||
Sbjct 1873322 TCAGACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGAT 1873381
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| |||||| | || | ||| || ||||| | ||||| ||||| |||| || ||
Sbjct 1873382 CAGCAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTAC 1873441
Query 156000 AATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
||||| || ||| || | || | ||||| |||||| | ||||||| |||
Sbjct 1873442 AATAT-TCAAAAGGAATCAACATTACATTTGGTGTTACGTCTAAGAGGTGGT 1873492
Score = 118 bits (130), Expect = 2e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || |||||||| ||||| || ||||||||||| ||| ||
Sbjct 1873493 ATGCAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873552
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| || || || | ||| || ||||| || ||||| || || ||||| ||
Sbjct 1873553 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873612
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| | || | ||| || ||||| | ||||| ||||| |||| || || |||
Sbjct 1873613 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873672
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| || | || | ||||| |||||| | ||||||| |||
Sbjct 1873673 AT-TCAAAAGGAATCAACATTACATTTGGTGTTACGTCTAAGAGGTGGT 1873720
Score = 118 bits (130), Expect = 2e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || |||||||| ||||| || ||||||||||| ||| ||
Sbjct 1873721 ATGCAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1873780
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| || || || | ||| || ||||| || ||||| || || ||||| ||
Sbjct 1873781 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1873840
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| | || | ||| || ||||| | ||||| ||||| |||| || || |||
Sbjct 1873841 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1873900
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| || | || | ||||| |||||| | ||||||| |||
Sbjct 1873901 AT-TCAAAAGGAATCAACATTACATTTGGTGTTACGTCTAAGAGGTGGT 1873948
Score = 113 bits (124), Expect = 7e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || |||||||| ||||| || ||||||||||| ||| ||
Sbjct 1873949 ATGCAAATTTTCGTGAAGACCTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCA 1874008
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| || || || | ||| || ||||| || ||||| || || ||||| ||
Sbjct 1874009 GACACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAG 1874068
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| | || | ||| || ||||| | ||||| ||||| |||| || || |||
Sbjct 1874069 CAAAGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAAT 1874128
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| || | || | ||||| |||||| | | ||||| |||
Sbjct 1874129 AT-TCAAAAGGAATCAACATTACATTTGGTGTTACGTCTTAGAGGTGGT 1874176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871862774000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |