Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq2 196 9e-45
seq1 172 1e-37
seq4 105 1e-17
>seq2
Length=2234776
Score = 196 bits (216), Expect = 9e-45
Identities = 589/917 (64%), Gaps = 18/917 (2%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || ||||||||| | |||||||| || || ||||| || | || || ||
Sbjct 2161570 TTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGCCAAAGAGATATTT 2161511
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTT-TTCT--CCTATCAATACATAT 38948
| ||| || ||||||||||| | || ||| || || | || ||| ||
Sbjct 2161510 TCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTTGCC---CAAAGCAAGA 2161454
Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
| ||||||||| || |||||||||||||| || |||| | | || |||||||| |||
Sbjct 2161453 AGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCAGTTCATACCTAAT 2161394
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068
|| | || || ||||| | | | ||||| ||||| ||||||| ||||
Sbjct 2161393 AAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGACAGCTTCAGTAATG 2161334
Query 39069 atcat---aattatattattttttgataatttatatttaatatgattcgcatataGTAAA 39125
||| | || ||| | | | | || | | | |||| | ||| ||
Sbjct 2161333 ATCTTTTCAACAATAACAGCGTCAGGTCTGTTGT---TCAAATGA---GAGAATAACAAG 2161280
Query 39126 CATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAAT 39185
|| ||||| || |||||||||||||| || || | || ||||| ||| || || |
Sbjct 2161279 CAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGTGAGA 2161220
Query 39186 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAAT 39245
|| |||||||| |||||||| || ||||| || || || ||||| | || |||||
Sbjct 2161219 CCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGAAGAAA 2161160
Query 39246 ATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAA 39305
||||| || ||| ||||| || | || |||| | ||||||| | || ||| ||
Sbjct 2161159 ATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTTCATCGTCATTG 2161100
Query 39306 ATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA 39365
||||| || ||||| || || |||| |||||| | || || ||||| ||||| ||
Sbjct 2161099 ATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCAATAGCATTG 2161040
Query 39366 AATAATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATT 39425
||||| | || || || ||
Sbjct 2161039 AATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAGTAAGGAGTAAGTT 2160980
Query 39426 TCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGCTTCTGAATAC 39485
||||| || | |||||| ||||| || ||| || | | ||||| | |
Sbjct 2160979 TCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGGCTTCAGGAAGT 2160920
Query 39486 TGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCG 39545
|||||||| | |||| ||| |||||||| ||| ||||||||||||||||| ||
Sbjct 2160919 TGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCATCAGATGCAGCA 2160860
Query 39546 AAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAA---TTTTCCCAA 39602
||||| ||||| || | ||||||| | ||||||| || || ||| |||||||||
Sbjct 2160859 AAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCATTGTCATTCAAACGGTTTTCCCAA 2160800
Query 39603 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTT 39662
| || ||| ||| ||| || | |||||| ||||| || || ||| | | |||
Sbjct 2160799 TCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAGCTTCAGCTTTC 2160740
Query 39663 TTATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAttt 39722
||||||||||| | || ||| || || ||| || || | ||| ||| |||| |||
Sbjct 2160739 TTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAATCTTTTATCGTTT 2160680
Query 39723 ttttCTAATATCGGTTC 39739
| | ||| | |||||
Sbjct 2160679 TCCTTTAACAAGGGTTC 2160663
>seq1
Length=2480924
Score = 172 bits (190), Expect = 1e-37
Identities = 178/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || ||||| || |||||||| || | || || |||||| || ||
Sbjct 1873494 ATACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCC 1873435
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || |||| |||| || ||||| || |||||||| || | ||| || || || |||
Sbjct 1873434 GATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGT 1873375
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || ||| | || ||||| ||||| ||||| |||||
Sbjct 1873374 GGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCA 1873315
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||||| || |||||||||||||| || || |||| || |||||||| ||
Sbjct 1873314 ACTTCTAATGTGATGGTTTTACCAGTCAAGGTCTTAACAAAGATCTGCATGTT 1873262
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||||||||| ||||| || |||||||| || | || || |||||| || || ||
Sbjct 1874176 ACCACCTCTAAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGA 1874117
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|| || |||| |||| || ||||| || |||||||| || | ||| || || || |||||
Sbjct 1874116 TAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGG 1874057
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| || ||| | || ||||| ||||| ||||| ||||| ||
Sbjct 1874056 AATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAAC 1873997
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || |||||||||||||| || || || | ||| || |||||
Sbjct 1873996 TTCTAATGTGATGGTTTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 1873949
Score = 167 bits (184), Expect = 4e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || ||||| || |||||||| || | || || |||||| || ||
Sbjct 1873722 ATACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCC 1873663
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || |||| |||| || ||||| || |||||||| || | ||| || || || |||
Sbjct 1873662 GATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGT 1873603
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || ||| | || ||||| ||||| ||||| |||||
Sbjct 1873602 GGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCA 1873543
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| || |||||||||||||| || || || | ||| || |||||
Sbjct 1873542 ACTTCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873493
Score = 167 bits (184), Expect = 4e-36
Identities = 175/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || ||||| || |||||||| || | || || |||||| || ||
Sbjct 1873950 ATACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCC 1873891
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| || |||| |||| || ||||| || |||||||| || | ||| || || || |||
Sbjct 1873890 GATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGT 1873831
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || ||| | || ||||| ||||| ||||| |||||
Sbjct 1873830 GGAATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCA 1873771
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||||| || |||||||||||||| || || || | ||| || |||||
Sbjct 1873770 ACTTCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873721
Score = 149 bits (164), Expect = 1e-30
Identities = 165/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| |||||||| | || || || || ||||| | ||||| ||| || ||| || ||
Sbjct 1632687 ATGATACCACCACGGAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAG 1632746
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || |||| || | |||| || ||||| ||||||||||| || || | |||||| ||
Sbjct 1632747 TCAGACAAAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCT 1632806
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| |||||||| || ||||| || || |||| ||||| ||||| || || |||
Sbjct 1632807 GGTGGAATTCCTTCCTTGTCTTGAATCTTGCTTTTGACATTGTCAATAGTGTCGGAAGAT 1632866
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 172056
|| ||||| | ||||| || ||||||||||| || ||||
Sbjct 1632867 TCAACTTCCAAGGTAATAGTCTTACCAGTTAAGGTCTTAA 1632906
>seq4
Length=1903616
Score = 105 bits (116), Expect = 1e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | || ||||| || ||||| | || | || || || || || || ||
Sbjct 1735257 ACCACCACGGAGACGTAAGACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGA 1735316
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| | || | | || ||||| || ||||||||||| || || | ||||| || || ||
Sbjct 1735317 AAGGGTTCTTCCATCTTCCAACTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGAGG 1735376
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
||||||||||| ||||| || ||| || ||||| || || ||||| || || ||
Sbjct 1735377 AATTCCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGACTCAAC 1735436
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||||||| || ||||| || | || |||| ||| || |||||
Sbjct 1735437 CTCGAGAGTAATAGTCTTACCCGTAAGGGTCTTAACGAAAATTTGCAT 1735484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135830287000
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