Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 181 3e-40
seq2 147 6e-30
seq11 136 1e-26
seq7 93.3 1e-13
>seq5
Length=1485630
Score = 181 bits (200), Expect = 3e-40
Identities = 637/979 (65%), Gaps = 28/979 (3%)
Strand=Plus/Minus
Query 155475 GGGTAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCAATACCTTGGTTACGTCT 155534
|| ||| |||| |||||| || || || ||||| |||||| ||||| || || ||
Sbjct 766838 GGATAATAATTTCTATCAATGATTTTGTTCAAATTATGAACCAAGACCTTAGTGACTTCA 766779
Query 155535 GCTAATTTCACATAGTCAAA--------TGTTT-TATCCTCATTTACAAACATACCAAGA 155585
||||||| || | || | | || |||| || | ||||| || | |
Sbjct 766778 TGTAATTTCTCAAAATCGTACCAACCCTTCTTACTATCACCAGTAACAAAAGTAGGTAAA 766719
Query 155586 CCAATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTC 155644
||| ||| |||| ||||||||| ||| || | | | | |||||| ||||| ||
Sbjct 766718 GCAAGAGAAGCCAAATTACATACAGCAACTTCATCAGGAGAAGA-GTATTCAACAATTTC 766660
Query 155645 ACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACA 155704
|||||| | ||| |||||| || | |||||| || || || || |||||
Sbjct 766659 ACAGCATAAATTACTTGATTTGATGACACCAAGATTCTTTTGATTGGACTTCTCATTACA 766600
Query 155705 AGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAG 155764
||| ||||| || || ||| ||||| || || || | || || |||| |||
Sbjct 766599 AGCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGTTTGAGCTTCCAAAATAGAGTA 766540
Query 155765 CCAGAGGTCACGGGCATTAATT-TGCTTGTTGTATCTGCCTTCCGACTCATAT--TTCAT 155821
||| || | | || || | | | ||| | ||| ||||| |||||| |||||
Sbjct 766539 CCAAAGTTTTTGAGCTTTCACTGTTCTTACAGC-TCTTCCTTCACGTTCATATCTTTCAT 766481
Query 155822 ATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCA 155881
| | ||| ||| | || | ||||||||||||| | || || | || || |
Sbjct 766480 ACAAAGC-TTCAA-ATTCTTTACCGTAACAATCAGATAAACCTGGAGCTTCATTAGGTGA 766423
Query 155882 AAACAGCGACCAAATTTTATTACC-GATTACACGCTC--CATAAATACATCACTCGCCCA 155938
||| | |||||| | | || | | || ||| |||||||| |||||| |||
Sbjct 766422 AAAGAAAGACCAA---TCACCGCCAGCCTCAACTCTCTTCATAAATAAATCACTAATCCA 766366
Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCTTCCGTAGCT 155997
| ||| || | || || || | ||| | || | | ||||||||||| | | |
Sbjct 766365 TAAGGCAACAAATAAATCTCTGGC-TCTGATTTCTTCTTTTCCGTGATTCTTTCTCACGT 766307
Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC 156057
| | ||| || ||||||||||| || || | || | ||| ||| |||| |
Sbjct 766306 CAATGAAATCAAAGATATCAGGATGCCAAGGTTCTAAGTATAAAGCGAAAGCACCAGGGC 766247
Query 156058 ---TCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114
| || ||||| || || ||||| | |||||| || ||||| |||| | ||| || |
Sbjct 766246 GTTTATTACCACCTTGGTCCACATATCTAGCAGTGTTGTTGAAAACACGCATCATGGGGA 766187
Query 156115 TAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTAT 156174
|||||||||| || || || || || || ||||| ||||||| ||| | || |||||
Sbjct 766186 TAATACCATTAGATGTTCCGTTAGTACCAGCAATATAAGAACCAGTTGATCTAATATTAT 766127
Query 156175 GAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTAT 156234
| ||||||| ||||||||||| | || ||||| || ||| || | |||||
Sbjct 766126 GGATATGTAAACCAATACCACCAGCAGTCTTGGAAATCAATGCACATGTTTTAAGAGTAT 766067
Query 156235 TGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAG 156294
| |||| |||||||| ||||| || | ||| | | | | || ||| | |||||
Sbjct 766066 CGTAAATGCCTTCAATTGAATCTTCCTTCATGGCAACCAAGAAACAAGAAGACATTTGAG 766007
Query 156295 GTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACA 156354
|| | ||||| ||||| || || | ||||||| ||||||| | |||||||| |||||
Sbjct 766006 GTTGAGGTGTACCAGCATTAAACAAAGTAGGTGATGCATGAGTGAAATACTTCAAAGACA 765947
Query 156355 TATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414
| ||| || || | ||| || |||| | | || ||||||| | || || |
Sbjct 765946 TCAAATTATAAGTTTTGATAACATTATCAATGTCATCGCCATGAATACCAACAGCAACTC 765887
Query 156415 TCATCCACATATGCTGAGG 156433
|||| ||| ||||| ||
Sbjct 765886 TCATAATCATGTGCTGGGG 765868
>seq2
Length=2234776
Score = 147 bits (162), Expect = 6e-30
Identities = 399/601 (66%), Gaps = 15/601 (2%)
Strand=Plus/Plus
Query 133065 ACGATAATAGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAA 133124
||||||| || |||||| | ||||||||||| | | || || ||||| |||||||| |
Sbjct 2160682 ACGATAAAAGATTTGTTCTTTTCCCAATTAAATATCATGAAATCTGGCAAATGTATAAGA 2160741
Query 133125 AACAGCAAGATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACT 133184
|| ||| || || |||||| || || | || ||| || || | |
Sbjct 2160742 AAGCTGAAGCTTCCTTCTGGACTGCAGAAGAGATTGACTTAGGAAAGGATGTTCATGATT 2160801
Query 133185 GGGAAGCCCTT---ACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTG 133241
||||| || | | || |||||| | ||||||||| | | ||||| || ||||
Sbjct 2160802 GGGAAAACCGTTTGAATGACAATGAAAGATTTTTTATTTCAAGAGTCTTAGCTTTCTTTG 2160861
Query 133242 CTGCGAGTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCA 133299
|||| ||||||||||||| ||||||||||| ||| || || | ||||||||
Sbjct 2160862 CTGCATCTGATGGTATTGTTAATGAAAATTTAGTAGAAAAC--TTCTCAGCTGAAGTTCA 2160919
Query 133300 ACTGGCCGAAGCC-CGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTA 133358
||| | |||||| ||| ||| ||||| | || || ||||||||| ||||| |||
Sbjct 2160920 ACTTCCTGAAGCCAAGTG-CTTCTATGGTTTCCAAATCATGATGGAAAACATCCACTCTG 2160978
Query 133359 TCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACA--AACT 133416
|| || || || ||||||||||| ||||| || || |||||| | | |
Sbjct 2160979 AAACTTACTCCTTACTGATTGATACTTATATCAAGGACAC--AAAGGAAGCAGATTATTT 2161036
Query 133417 ATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATG 133476
|||||| || ||| | |||| || || ||| | || |||| |||||| | |||
Sbjct 2161037 ATTCAATGCTATTGAAAACATTCCATGCATCAAACAAAAGGCTGAATGGGCTTTACGATG 2161096
Query 133477 GATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGG 133536
|||| | ||| | || |||| | | | ||||| ||||||| || || ||
Sbjct 2161097 GATCAATGACGATGAAGCATTGTTTGGTGAAAGATTAGTTGCCTTTGCTGCTGTTGAAGG 2161156
Query 133537 CAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTAC 133595
||||| ||| || |||| ||| ||||| || ||||| || ||| | ||| | | |
Sbjct 2161157 TATTTTCTTCTCGGGCTCGTT-TGCTTCTATCTTCTGGCTCAAGAAGAGAGGTTTAATGC 2161215
Query 133596 CTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTG 133655
|||| || || ||||||||| | || | || || || | | || || || ||||
Sbjct 2161216 CTGGTCTCACATTCTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACTGACTTTG 2161275
Query 133656 C 133656
|
Sbjct 2161276 C 2161276
>seq11
Length=408711
Score = 136 bits (150), Expect = 1e-26
Identities = 584/918 (64%), Gaps = 33/918 (4%)
Strand=Plus/Plus
Query 155600 ATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAG 155658
||| ||||| || || |||| || | || ||| | ||||| |||||||| || ||||
Sbjct 180530 ATTGCATACAGCTGTTTCCTCTGGTGACGA-GTACTGAACAATTTCACAGCATAGATTAG 180588
Query 155659 AACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATA 155718
| ||||| || || | |||||||||||| |||||||| ||||||| |||||| || |
Sbjct 180589 ATGATTTGATAGTTCCGAGATTCTTCTGGTTTGATTTACTATTACAAGAATCCTTATAAA 180648
Query 155719 GAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGG 155778
| ||| | || ||| ||||| | || | || || || | |||| | | |||
Sbjct 180649 GCATGAAAGGTCCTCCAGTCTCTACTTGAGATTCAAGTATACTGTGCCATAATTTCTGGG 180708
Query 155779 CATT---AATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAGCGTTCGGT 155835
| || || | || || | || ||||| | | |||||| |||||||| ||
Sbjct 180709 CCTTCACAACT--CTCGTAA-ACCTCCCTTCAGCAACGTATTTCGTATACAGCTTTTCAA 180765
Query 155836 AATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAA 155895
| ||||||| | ||| |||||||| | | | | || |||| | |||
Sbjct 180766 ATTCCTCACTACACGTATCGGCAAGTCCAGGCGAATCAACAGGTGAAAATAAATGCCAGT 180825
Query 155896 TTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGT 155955
| ||| | || || |||||||| || ||| | |||||||| ||||
Sbjct 180826 CATCATTGCTTTCAACTTTCTTCATAAATAGGTCGGGTATCCATAATGCATAGAAGAGGT 180885
Query 155956 CCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATAT 156015
| | || || |||| || | || ||||| || | || || | |||||| ||||
Sbjct 180886 CACGAGCTCTTAACTCTTCTTTACCATGATTTTTTCTTAAGTCAAGGAATTCGAATATAT 180945
Query 156016 CAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGAT 156072
|| ||| ||| || || || || |||||| || || ||| || || ||||
Sbjct 180946 CATTATGCCATGGTTCAAGGTATATTGCAAAAGCGCCCGGTCTTTTGTTTCCCCCTTGAT 181005
Query 156073 CTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGC 156132
| || || | |||||| |||||||| || | | ||| |||| | ||||| || || |
Sbjct 181006 CAACGTATCTAGCAGTGTTATTGAAAACTCGCAACATGGGAACTAACCCATTCGAGGTAC 181065
Query 156133 CATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATAC 156192
| || ||||| | || | ||||| || | || |||||||| | || || || |
Sbjct 181066 CGTTAGTTCCTCTTATGTAGGAACCTCTAGATCTAATATTATGAACACTTAAGCCTATTC 181125
Query 156193 CACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAG 156252
|||| | | || || || || || || | || ||| | || ||| ||||
Sbjct 181126 CACCAGCGAACTTGGAGATACTTGCACAATCTGCCAATGTCTTGTATATTCCTGTGATAG 181185
Query 156253 AATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGT 156312
||||||| ||| | | ||| | || || ||||| || ||||| | |
Sbjct 181186 AATCATCCGACATGGCCAAGAGAAAACAGGATGACAATTGCGGGAAAATGGTTCCTGAAT 181245
Query 156313 TGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTC-- 156370
| |||| ||| || || ||||||||||| ||| | || ||||| | |||||||| ||
Sbjct 181246 TAAATAATGTTGGAGTAGCATGAATAAAGTACCTCTTGGACATTAACTCGTATGTTTCAA 181305
Query 156371 -------CTT--AATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCA 156421
||| |||| ||| || ||| || | |||| || |||||| |
Sbjct 181306 AGGCAGACTTCAAATCCTCT-----TT------GTGTATGCCAATAGCTACTCTCATCAA 181354
Query 156422 CATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAG 156481
||||| || || |||| ||| ||| ||| | ||| | ||||| ||||||
Sbjct 181355 CATATATTGRGGTGTTTCTATAATTTTTCCTTCATATTTCAGCAAGTATGATTTTTCCAG 181414
Query 156482 AGTTTTAAACCCGAAATA 156499
|||||| |||||||| ||
Sbjct 181415 AGTTTTGAACCCGAAGTA 181432
Score = 91.5 bits (100), Expect = 4e-13
Identities = 118/161 (73%), Gaps = 4/161 (2%)
Strand=Plus/Plus
Query 233273 GCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTT 233332
|| || | |||||| | || || | |||||||||||| | | || ||||||||| ||
Sbjct 163941 GCGCCATAAGCAATAACGCAGTCTCTTTCCATTTCACCCAATCTCAAACCACCATCTCTT 164000
Query 233333 GACCTACC--CTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAAT 233390
|| || || ||| | | ||||||||||||||||| ||| || || ||||||| ||
Sbjct 164001 GATCTGCCTTCTGTA--GGTTGACGAGTTAAAACAGCTCTAGGGCCTCTAGCACGAGCAT 164058
Query 233391 TAATTTTATCTTTAACCATATGCTTCAGTCTCATATAATAA 233431
|||||||| ||||||||||||| || |||||||
Sbjct 164059 GCATTTTATCCAACACCATATGCTTCAACTTCTGATAATAA 164099
>seq7
Length=1328185
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | || |||||||||||| || || || || | || |||||||||
Sbjct 617530 AGAATTTCCTTAAGACGGGGAACACCCAATGTAACATTT---TTAGCCGAAACACCAGCG 617474
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
| |||||||||||||| || | |||||||| ||||||||||| ||| || |||||
Sbjct 617473 TAATGGAAAGTATTCAGTGTCATTTGAGTAGCAGGCTCACCAATTGATTGGGCTGCAATA 617414
Query 301933 ATACCAACCATTTCTCCTGG 301952
| || |||||||| || ||
Sbjct 617413 ACGCCTACCATTTCGCCAGG 617394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817317135055
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