Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 6e-11 >seq1 Length=2480924 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623 |||||| || || ||||| || || || |||||| | ||| || || ||| ||| | Sbjct 1632911 TTTTGTTAAGACCTTAACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACTAT 1632852 Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683 | | | || ||| |||||| || || ||||| | || ||||| ||| | | Sbjct 1632851 TGACAATGTCAAAAGCAAGATTCAAGACAAGGAAGGAATTCCACCAGATCAACAGCGTTT 1632792 Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743 || | ||| ||||| || | || |||| | ||| || | ||||||||||||||||| Sbjct 1632791 GATCTTTGCTGGTAAGCAATTAGAAGACGGAAGAACTTTGTCTGACTACAACATTCAAAA 1632732 Query 107744 GGAGTCTACGTTGCACATGGTGTTG 107768 ||||||||| | || |||| ||| Sbjct 1632731 GGAGTCTACTCTCCATTTGGTCTTG 1632707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876727080335