Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq7 86.0 8e-12
>seq7
Length=1328185
Score = 86.0 bits (94), Expect = 8e-12
Identities = 141/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 162998 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAA 163057
||||||||||||| ||| ||| || || ||||||| || | || | || ||||||
Sbjct 1044135 ATTAAGGTTGCTCTATTGGCTGGCTACATTTCGGAACATACCGGATACCACCATGGTGAA 1044076
Query 163058 CAAAATTTATGTG-AAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT 163116
||| || ||| ||||||| | | | ||||||||||||||||| ||||||| ||
Sbjct 1044075 CAATCATTG-GTGCAAACTATTGTCGGGCTCGCCCAAGATTTTGTTGGGTCAAATAACAT 1044017
Query 163117 AGCATTACTTGAA-CCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 163175
|| || || ||| | ||| || ||||| |||| |||| || |||||| | |
Sbjct 1044016 -CTATCTTTTAAACCCTAAAGGTTGTTTCGGTACAAGATCTCAAGGCGGCAAAGATGCCG 1043958
Query 163176 CGGCATCAAGATATATTT 163193
| ||| ||||||| ||||
Sbjct 1043957 CAGCAGCAAGATACATTT 1043940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635177480904200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |