Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq7 82.4 1e-10 >seq7 Length=1328185 Score = 82.4 bits (90), Expect = 1e-10 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 ||||| ||||||| ||| ||| || || | ||||| || | || | ||||||||| Sbjct 1044135 ATTAAGGTTGCTCTATTGGCTGGCTACATTTCGGAACATACCGGATACCACCATGGTGAA 1044076 Query 165220 CAAAATTTATGTG-AAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATAT 165278 ||| || ||| ||||||| | | | ||||||||||||||||| ||||||| || Sbjct 1044075 CAATCATTG-GTGCAAACTATTGTCGGGCTCGCCCAAGATTTTGTTGGGTCAAATAACAT 1044017 Query 165279 AGCATTACTTGAA-CCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 165337 || || || ||| | ||| || ||||| |||| |||| || |||||| | | Sbjct 1044016 -CTATCTTTTAAACCCTAAAGGTTGTTTCGGTACAAGATCTCAAGGCGGCAAAGATGCCG 1043958 Query 165338 CGGCATCAAGATATATTT 165355 | ||| ||||||| |||| Sbjct 1043957 CAGCAGCAAGATACATTT 1043940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531082150400