Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 232 2e-55
seq2 178 3e-39
seq11 125 2e-23
>seq5
Length=1485630
Score = 232 bits (256), Expect = 2e-55
Identities = 575/864 (67%), Gaps = 13/864 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|| |||||||||||||| | || || |||||||| | | || ||||| | || |
Sbjct 765802 TACTTTGGTTTCAAAACATTAGAGCGATCTTATTTATTAAGAGTAGATGGCAAAGTCGCT 765861
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||| | || || |||||| || | | ||||| ||||||||||||| |||| ||| |
Sbjct 765862 GAAAGACCCCAGCACATGATTATGAGAGTTGCTGTTGGTATTCATGGCGATGACATTGAT 765921
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||||| || |||| || | | | ||| | | |||||| | |||||
Sbjct 765922 AATGTTATCAAAACTTATAATTTGATGTCTTTGAAGTATTTCACTCATGCATCACCTACT 765981
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| ||||| || || || | | ||| || ||||||| |||||| | | || ||
Sbjct 765982 TTGTTTAATGCTGGTACACCTCAACCTCAAATGTCTTCTTG-TTTCTTGGTTGCCATGAA 766040
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| ||||| |||||||| ||||| ||| |||||||| | ||| | ||||| || |
Sbjct 766041 GGAAGATTCAATTGAAGGCATTTACGATACTCTTAAAACATGTGCATTGATTTCCAAGAC 766100
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || | ||| ||||| | |||| || | |||| ||
Sbjct 766101 TGCTGGTGGTATTGGTTTACATATCCATAATATTAGATCAACTGGTTCTTATATTGCTGG 766160
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || || | || | ||| || | || ||| | | || |||||| ||||||| |
Sbjct 766161 TACTAACGGAACATCTAATGGTATTATCCCCATGATGCGTGTTTTCAACAACACTGCTAG 766220
Query 110723 ATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||||| | ||||||||||| | | ||| | || ||| | || | ||||||||
Sbjct 766221 ATATGTGGACCAAGGTGGTAATAAACGCCCTGGTGCTTTCGCTTTATACTTAGAACCTTG 766280
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839
|||| | ||||| ||||| ||| | || | | || ||||| ||| |||||| ||
Sbjct 766281 GCATCCTGATATCTTTGATTTCATTGACGTGAGAAAGAATCACGGAAAAGAAGAAATCAG 766340
Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899
||| | ||||||||| ||| | |||||| |||||||| ||||| | ||| ||
Sbjct 766341 AGCCAGAGATTTATTTGTTGCCTTATGGATTAGTGATTTATTTATGAAGAGAGTT---GA 766397
Query 110900 AAATGGC-ATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956
|||| || |||||| | | | ||| || |||| ||| |||||||| ||
Sbjct 766398 GGCTGGCGGTGATTGGTCTTTCTTTTCACCTAATGAAGCTCCAGGTTTATCTGATTGTTA 766457
Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-AC 111015
|| ||||| ||||||| | || |||| ||||||| ||||| ||| | || |
Sbjct 766458 CGGTAAAGAATTTGAAGCTTTGTATGAAAGATATGAACGTGAAGG-AAGAGCTGTAAGAA 766516
Query 111016 AAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075
| | ||||||| ||||||||| | || | ||| | ||| ||||||||| |
Sbjct 766517 CAGTGAAAGCTCAAAAACTTTGGTACTCTATTTTGGAAGCTCAAACTGAAACTGGTGTCC 766576
Query 111076 CTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAA 111135
| | || | ||||| || | |||| || || ||||||| |||| | || |
Sbjct 766577 CATTCATGCTTTATAAGGACGCTTGTAATGAGAAGTCCAATCAAAAGAATCTTGGTGTCA 766636
Query 111136 TTAAGTCTAGTAATTTGTGCTGTG 111159
| || || |||||||| |||||||
Sbjct 766637 TCAAATCAAGTAATTTATGCTGTG 766660
>seq2
Length=2234776
Score = 178 bits (196), Expect = 3e-39
Identities = 394/584 (67%), Gaps = 13/584 (2%)
Strand=Plus/Plus
Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491
|| || ||||||||| |||| || | | | |||||||||||| ||| || |||||
Sbjct 2160699 CTTTTCCCAATTAAATATCATGAAATCTGGCAAATGTATAAGAAAGCTGAAGCTTCCTTC 2160758
Query 131492 TGGACTGTTGAAGAGATCGA--TATGACCAAAGATATTGATGATTGGGAAAAA---TTAA 131546
||||||| |||||||| || || || || ||| || ||||||||||||| || |
Sbjct 2160759 TGGACTGCAGAAGAGATTGACTTAGGA--AAGGATGTTCATGATTGGGAAAACCGTTTGA 2160816
Query 131547 CCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCA 131606
||||||| | |||| |||| | ||| | || ||||| || | | |||||| |
Sbjct 2160817 ATGACAATGAAAGATTTTTTATTTCAAGAGTCTTAGCTTTCTTTGCTGCATCTGATGGTA 2160876
Query 131607 TTGTTATTGAAAATCTTGTTATTAATTTCATTCAA--GAAATTGATATTCCTGAAGTAAC 131664
|||||| ||||||| | || || ||| ||| ||| || | ||||||||| |
Sbjct 2160877 TTGTTAATGAAAATTTAGTAGAAAACTTC--TCAGCTGAAGTTCAACTTCCTGAAGCCAA 2160934
Query 131665 ATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATT 131724
| ||||| || ||| | | ||| || || || | || || ||| |
Sbjct 2160935 GTGCTTCTATGGTTTCCAAATCATGATGGAAAACATCCACTCTGAAACTTACTCCTTACT 2160994
Query 131725 GATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAA 131784
|||||| | | | | || | | | || | || | ||||| ||||| | | ||
Sbjct 2160995 GATTGATACTTATATCAAGGACACAAAGGAAGCAGATTATTTATTCAATGCTATTGAAAA 2161054
Query 131785 ATTTCC-TGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCG 131843
|||| |||| | ||| | || || ||||||||| | |||||| | || ||| |
Sbjct 2161055 CATTCCATGCA-TCAAACAAAAGGCTGAATGGGCTTTACGATGGATCAATGACGATGAAG 2161113
Query 131844 CTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTG 131903
| ||| | |||| | || || |||||| |||||||||||| ||||| || ||
Sbjct 2161114 CATTGTTTGGTGAAAGATTAGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCGGGCT 2161173
Query 131904 CTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCA 131963
| || | ||||||| ||||| |||||| | || || |||||||| ||| |||| || |
Sbjct 2161174 CGTTTGCTTCTATCTTCTGGCTCAAGAAGAGAGGTTTAATGCCTGGTCTCACATTCTCTA 2161233
Query 131964 ATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCT 132007
| |||| |||| |||||||||| || |||||||| ||||||
Sbjct 2161234 ACGAATTGATCTGCAGAGATGAAGGTTTACATACTGACTTTGCT 2161277
>seq11
Length=408711
Score = 125 bits (138), Expect = 2e-23
Identities = 454/703 (65%), Gaps = 13/703 (2%)
Strand=Plus/Minus
Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524
||||||||||||||| || ||||||| ||||||| | | |||||| | || ||
Sbjct 181271 TATTCATGCTACTCCAACATTATTTAATTCAGGAACCATTTTCCCGCAATTGTCATCCTG 181212
Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584
||||| | | || ||||||||||| ||| || || | | | |||
Sbjct 181211 TTTTCTCTTGGCCATGTCGGATGATTCTATCACAGGAATATACAAGACATTGGCAGATTG 181152
Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAA 110644
||| ||| || || | |||| ||||| || | |||||| ||||| | || |
Sbjct 181151 TGCAAGTATCTCCAAGTTCGCTGGTGGAATAGGCTTAAGTGTTCATAATATTAGATCTAG 181092
Query 110645 AGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGT 110704
||| | | || | | | || ||| | || | ||| | ||||| ||||| ||||
Sbjct 181091 AGGTTCCTACATAAGAGGAACTAACGGTACCTCGAATGGGTTAGTTCCCATGTTGCGAGT 181032
Query 110705 CTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGC 110761
||||| ||||||| | ||| || ||||||| || || ||| ||| | |||||
Sbjct 181031 TTTCAATAACACTGCTAGATACGTTGATCAAGGGGGAAACAAAAGACCGGGCGCTTTTGC 180972
Query 110762 TATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCA 110821
|| || || ||||| |||||| |||||||| |||||| | || | | ||||||||
Sbjct 180971 AATATACCTTGAACCATGGCATAATGATATATTCGAATTCCTTGACTTAAGAAAAAATCA 180912
Query 110822 AGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATT 110881
|| ||||| |||||| ||||| | || |||||| | ||||| | || ||||
Sbjct 180911 TGGTAAAGAAGAGTTAAGAGCTCGTGACCTCTTCTATGCATTATGGATACCCGACCTATT 180852
Query 110882 CATGAAACGTGTTCAAGAAAATGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCT 110939
||||| ||| || |||| ||| ||| | | | | ||| | ||| |||
Sbjct 180851 TATGAAGAAAGTTGAAAGCAATG--ATGACTGGCATTTATTTTCACCTGTTGATTCGCCT 180794
Query 110940 GGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999
|| || | ||| | | | | || |||||| | || || ||||| | |||
Sbjct 180793 GGACTTGCCGATACGTGTAGTGAGGAATTTGAAAAGCTGTATACGAAATACGTTGCTGAA 180734
Query 111000 GGCAAGTTT-CGCAAACAAAT-TCCAGCTCAAGAACTT-TGGTTCAAAATCCTTGAATCA 111056
|| | |||| || | | | | || | |||| || ||| || || ||||||||
Sbjct 180733 GGGAGGTTTACG---AGAGTTGTGAAGGCCCAGAAATTATGGCACAGTATACTTGAATCT 180677
Query 111057 CAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAAT 111116
||||| || |||||| |||| || | ||||| ||| | |||| | ||||| ||
Sbjct 180676 CAAGTAGAGACTGGAGGACCTTTCATGCTTTATAAGGATTCTTGTAATAGTAAATCAAAC 180617
Query 111117 CAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|| | |||| | ||||| || || || |||| | |||||||
Sbjct 180616 CAGAAGAATCTCGGAACTATCAAATCATCTAATCTATGCTGTG 180574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812571909415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |