Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5 232 2e-55 seq2 178 3e-39 seq11 125 2e-23 >seq5 Length=1485630 Score = 232 bits (256), Expect = 2e-55 Identities = 575/864 (67%), Gaps = 13/864 (2%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || |||||||||||||| | || || |||||||| | | || ||||| | || | Sbjct 765802 TACTTTGGTTTCAAAACATTAGAGCGATCTTATTTATTAAGAGTAGATGGCAAAGTCGCT 765861 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | || || |||||| || | | ||||| ||||||||||||| |||| ||| | Sbjct 765862 GAAAGACCCCAGCACATGATTATGAGAGTTGCTGTTGGTATTCATGGCGATGACATTGAT 765921 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 |||||| || |||| || | | | ||| | | |||||| | ||||| Sbjct 765922 AATGTTATCAAAACTTATAATTTGATGTCTTTGAAGTATTTCACTCATGCATCACCTACT 765981 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542 | ||||| || || || | | ||| || ||||||| |||||| | | || || Sbjct 765982 TTGTTTAATGCTGGTACACCTCAACCTCAAATGTCTTCTTG-TTTCTTGGTTGCCATGAA 766040 Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602 || ||||| |||||||| ||||| ||| |||||||| | ||| | ||||| || | Sbjct 766041 GGAAGATTCAATTGAAGGCATTTACGATACTCTTAAAACATGTGCATTGATTTCCAAGAC 766100 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 |||| || |||||| | || | ||| ||||| | |||| || | |||| || Sbjct 766101 TGCTGGTGGTATTGGTTTACATATCCATAATATTAGATCAACTGGTTCTTATATTGCTGG 766160 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || || | || | ||| || | || ||| | | || |||||| ||||||| | Sbjct 766161 TACTAACGGAACATCTAATGGTATTATCCCCATGATGCGTGTTTTCAACAACACTGCTAG 766220 Query 110723 ATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779 ||||||| | ||||||||||| | | ||| | || ||| | || | |||||||| Sbjct 766221 ATATGTGGACCAAGGTGGTAATAAACGCCCTGGTGCTTTCGCTTTATACTTAGAACCTTG 766280 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839 |||| | ||||| ||||| ||| | || | | || ||||| ||| |||||| || Sbjct 766281 GCATCCTGATATCTTTGATTTCATTGACGTGAGAAAGAATCACGGAAAAGAAGAAATCAG 766340 Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 ||| | ||||||||| ||| | |||||| |||||||| ||||| | ||| || Sbjct 766341 AGCCAGAGATTTATTTGTTGCCTTATGGATTAGTGATTTATTTATGAAGAGAGTT---GA 766397 Query 110900 AAATGGC-ATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956 |||| || |||||| | | | ||| || |||| ||| |||||||| || Sbjct 766398 GGCTGGCGGTGATTGGTCTTTCTTTTCACCTAATGAAGCTCCAGGTTTATCTGATTGTTA 766457 Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-AC 111015 || ||||| ||||||| | || |||| ||||||| ||||| ||| | || | Sbjct 766458 CGGTAAAGAATTTGAAGCTTTGTATGAAAGATATGAACGTGAAGG-AAGAGCTGTAAGAA 766516 Query 111016 AAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075 | | ||||||| ||||||||| | || | ||| | ||| ||||||||| | Sbjct 766517 CAGTGAAAGCTCAAAAACTTTGGTACTCTATTTTGGAAGCTCAAACTGAAACTGGTGTCC 766576 Query 111076 CTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAA 111135 | | || | ||||| || | |||| || || ||||||| |||| | || | Sbjct 766577 CATTCATGCTTTATAAGGACGCTTGTAATGAGAAGTCCAATCAAAAGAATCTTGGTGTCA 766636 Query 111136 TTAAGTCTAGTAATTTGTGCTGTG 111159 | || || |||||||| ||||||| Sbjct 766637 TCAAATCAAGTAATTTATGCTGTG 766660 >seq2 Length=2234776 Score = 178 bits (196), Expect = 3e-39 Identities = 394/584 (67%), Gaps = 13/584 (2%) Strand=Plus/Plus Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491 || || ||||||||| |||| || | | | |||||||||||| ||| || ||||| Sbjct 2160699 CTTTTCCCAATTAAATATCATGAAATCTGGCAAATGTATAAGAAAGCTGAAGCTTCCTTC 2160758 Query 131492 TGGACTGTTGAAGAGATCGA--TATGACCAAAGATATTGATGATTGGGAAAAA---TTAA 131546 ||||||| |||||||| || || || || ||| || ||||||||||||| || | Sbjct 2160759 TGGACTGCAGAAGAGATTGACTTAGGA--AAGGATGTTCATGATTGGGAAAACCGTTTGA 2160816 Query 131547 CCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCA 131606 ||||||| | |||| |||| | ||| | || ||||| || | | |||||| | Sbjct 2160817 ATGACAATGAAAGATTTTTTATTTCAAGAGTCTTAGCTTTCTTTGCTGCATCTGATGGTA 2160876 Query 131607 TTGTTATTGAAAATCTTGTTATTAATTTCATTCAA--GAAATTGATATTCCTGAAGTAAC 131664 |||||| ||||||| | || || ||| ||| ||| || | ||||||||| | Sbjct 2160877 TTGTTAATGAAAATTTAGTAGAAAACTTC--TCAGCTGAAGTTCAACTTCCTGAAGCCAA 2160934 Query 131665 ATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATT 131724 | ||||| || ||| | | ||| || || || | || || ||| | Sbjct 2160935 GTGCTTCTATGGTTTCCAAATCATGATGGAAAACATCCACTCTGAAACTTACTCCTTACT 2160994 Query 131725 GATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAATAA 131784 |||||| | | | | || | | | || | || | ||||| ||||| | | || Sbjct 2160995 GATTGATACTTATATCAAGGACACAAAGGAAGCAGATTATTTATTCAATGCTATTGAAAA 2161054 Query 131785 ATTTCC-TGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCG 131843 |||| |||| | ||| | || || ||||||||| | |||||| | || ||| | Sbjct 2161055 CATTCCATGCA-TCAAACAAAAGGCTGAATGGGCTTTACGATGGATCAATGACGATGAAG 2161113 Query 131844 CTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTG 131903 | ||| | |||| | || || |||||| |||||||||||| ||||| || || Sbjct 2161114 CATTGTTTGGTGAAAGATTAGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCGGGCT 2161173 Query 131904 CTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCA 131963 | || | ||||||| ||||| |||||| | || || |||||||| ||| |||| || | Sbjct 2161174 CGTTTGCTTCTATCTTCTGGCTCAAGAAGAGAGGTTTAATGCCTGGTCTCACATTCTCTA 2161233 Query 131964 ATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCT 132007 | |||| |||| |||||||||| || |||||||| |||||| Sbjct 2161234 ACGAATTGATCTGCAGAGATGAAGGTTTACATACTGACTTTGCT 2161277 >seq11 Length=408711 Score = 125 bits (138), Expect = 2e-23 Identities = 454/703 (65%), Gaps = 13/703 (2%) Strand=Plus/Minus Query 110465 TATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTG 110524 ||||||||||||||| || ||||||| ||||||| | | |||||| | || || Sbjct 181271 TATTCATGCTACTCCAACATTATTTAATTCAGGAACCATTTTCCCGCAATTGTCATCCTG 181212 Query 110525 CTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC 110584 ||||| | | || ||||||||||| ||| || || | | | ||| Sbjct 181211 TTTTCTCTTGGCCATGTCGGATGATTCTATCACAGGAATATACAAGACATTGGCAGATTG 181152 Query 110585 TGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAA 110644 ||| ||| || || | |||| ||||| || | |||||| ||||| | || | Sbjct 181151 TGCAAGTATCTCCAAGTTCGCTGGTGGAATAGGCTTAAGTGTTCATAATATTAGATCTAG 181092 Query 110645 AGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGT 110704 ||| | | || | | | || ||| | || | ||| | ||||| ||||| |||| Sbjct 181091 AGGTTCCTACATAAGAGGAACTAACGGTACCTCGAATGGGTTAGTTCCCATGTTGCGAGT 181032 Query 110705 CTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGC 110761 ||||| ||||||| | ||| || ||||||| || || ||| ||| | ||||| Sbjct 181031 TTTCAATAACACTGCTAGATACGTTGATCAAGGGGGAAACAAAAGACCGGGCGCTTTTGC 180972 Query 110762 TATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCA 110821 || || || ||||| |||||| |||||||| |||||| | || | | |||||||| Sbjct 180971 AATATACCTTGAACCATGGCATAATGATATATTCGAATTCCTTGACTTAAGAAAAAATCA 180912 Query 110822 AGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATT 110881 || ||||| |||||| ||||| | || |||||| | ||||| | || |||| Sbjct 180911 TGGTAAAGAAGAGTTAAGAGCTCGTGACCTCTTCTATGCATTATGGATACCCGACCTATT 180852 Query 110882 CATGAAACGTGTTCAAGAAAATGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCT 110939 ||||| ||| || |||| ||| ||| | | | | ||| | ||| ||| Sbjct 180851 TATGAAGAAAGTTGAAAGCAATG--ATGACTGGCATTTATTTTCACCTGTTGATTCGCCT 180794 Query 110940 GGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999 || || | ||| | | | | || |||||| | || || ||||| | ||| Sbjct 180793 GGACTTGCCGATACGTGTAGTGAGGAATTTGAAAAGCTGTATACGAAATACGTTGCTGAA 180734 Query 111000 GGCAAGTTT-CGCAAACAAAT-TCCAGCTCAAGAACTT-TGGTTCAAAATCCTTGAATCA 111056 || | |||| || | | | | || | |||| || ||| || || |||||||| Sbjct 180733 GGGAGGTTTACG---AGAGTTGTGAAGGCCCAGAAATTATGGCACAGTATACTTGAATCT 180677 Query 111057 CAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAAT 111116 ||||| || |||||| |||| || | ||||| ||| | |||| | ||||| || Sbjct 180676 CAAGTAGAGACTGGAGGACCTTTCATGCTTTATAAGGATTCTTGTAATAGTAAATCAAAC 180617 Query 111117 CAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGCTGTG 111159 || | |||| | ||||| || || || |||| | ||||||| Sbjct 180616 CAGAAGAATCTCGGAACTATCAAATCATCTAATCTATGCTGTG 180574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812571909415