Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 2e-28
seq4 96.9 2e-15
>seq1
Length=2480924
Score = 140 bits (154), Expect = 2e-28
Identities = 175/235 (74%), Gaps = 5/235 (2%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | ||||||||||||||||| || || ||||| || ||||| || ||
Sbjct 1873492 ACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGA 1873433
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| |||| || ||||| ||||| ||||| || | | ||||||||| | ||
Sbjct 1873432 TAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGG 1873373
Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| |||||| ||||| ||| || || || |||| ||| | ||||| ||||||
Sbjct 1873372 AATACCTTCCTTGTCTTGAATCTTACTCTT--GACATTGTCAATAGTGTCTGATGATTCA 1873315
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTG 33754
|| || | ||||| |||||||| || || || || |||||||||||||| ||||
Sbjct 1873314 ACTTCTAATGTGATGGTTTTACCAGTCAAGGTCTTAACAAAGATCTGCAT-GTTG 1873261
Score = 127 bits (140), Expect = 1e-24
Identities = 169/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | ||||||||||||||||| || || ||||| || ||||| || ||
Sbjct 1873720 ACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGA 1873661
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| |||| || ||||| ||||| ||||| || | | ||||||||| | ||
Sbjct 1873660 TAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGG 1873601
Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| |||||| ||||| ||| || || || |||| ||| | ||||| ||||||
Sbjct 1873600 AATACCTTCCTTGTCTTGAATCTTACTCTT--GACATTGTCAATAGTGTCTGATGATTCA 1873543
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | ||||| |||||||| || || || || || || || ||||||
Sbjct 1873542 ACTTCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCATA 1873492
Score = 127 bits (140), Expect = 1e-24
Identities = 169/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | ||||||||||||||||| || || ||||| || ||||| || ||
Sbjct 1873948 ACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGA 1873889
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| |||| || ||||| ||||| ||||| || | | ||||||||| | ||
Sbjct 1873888 TAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGG 1873829
Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| |||||| ||||| ||| || || || |||| ||| | ||||| ||||||
Sbjct 1873828 AATACCTTCCTTGTCTTGAATCTTACTCTT--GACATTGTCAATAGTGTCTGATGATTCA 1873771
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | ||||| |||||||| || || || || || || || ||||||
Sbjct 1873770 ACTTCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCATA 1873720
Score = 127 bits (140), Expect = 1e-24
Identities = 169/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | ||||||||||||||||| || || ||||| || ||||| || ||
Sbjct 1874176 ACCACCTCTAAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGA 1874117
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| |||| || ||||| ||||| ||||| || | | ||||||||| | ||
Sbjct 1874116 TAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGG 1874057
Query 33642 CACACCTTCTTTGTCGGCAAT-TTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| |||||| ||||| ||| || || || |||| ||| | ||||| ||||||
Sbjct 1874056 AATACCTTCCTTGTCTTGAATCTTACTCTT--GACATTGTCAATAGTGTCTGATGATTCA 1873999
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| || | ||||| |||||||| || || || || || || || ||||||
Sbjct 1873998 ACTTCTAATGTGATGGTTTTACCAGTCAAGGTCTTCACGAAAATTTGCATA 1873948
Score = 114 bits (126), Expect = 8e-21
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| || |||||||| ||||| ||| ||||| |||||||| || ||
Sbjct 1632692 ACCACCACGGAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 1632751
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | |||| || ||||| || || ||||| ||||||||||| |||||| | ||
Sbjct 1632752 CAAAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGG 1632811
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| ||| || ||| |||| ||| | |||||| ||||| |
Sbjct 1632812 AATTCCTTCCTTGTCTTGAATCTT-GCTTTTGACATTGTCAATAGTGTCGGAAGATTCAA 1632870
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | || || || ||||| ||||| || || |||||
Sbjct 1632871 CTTCCAAGGTAATAGTCTTACCAGTTAAGGTCTTAACAAA 1632910
>seq4
Length=1903616
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | | |||||| |||||||| || || || ||||| |||||||| || |
Sbjct 1735256 CACCACCACGGAGACGTAAGACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAG 1735315
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || || | | | || ||||| || || || ||||| |||||||| || |||||| | |
Sbjct 1735316 AAAGGGTTCTTCCATCTTCCAACTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGAG 1735375
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||||||||| ||| || | | |||| ||| | |||||| || ||
Sbjct 1735376 GAATTCCTTCTTTGTCTTGAATCTT-AGACTTGACATTGTCAATGGTGTCTGAAGACTCA 1735434
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || || ||||| || | || || || || || |||||
Sbjct 1735435 ACCTCGAGAGTAATAGTCTTACCCGTAAGGGTCTTAACGAAAATTTGCAT 1735484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703939908800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |