Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq5 100 7e-16
seq1 95.1 3e-14
>seq5
Length=1485630
Score = 100 bits (110), Expect = 7e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|||||||| || | ||||| || | |||| || | |||||| ||||||| || |
Sbjct 766598 GCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGTTTGAGCTTCCAAAATAGAGTAC 766539
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
||||||| ||| ||||| || || || ||||||||||| ||| ||||| |||||
Sbjct 766538 CAAAGTTTTTGAGCTTTCACTGTTCTTACAGCTCTTCCTTCACGTTCATATCTTTCATAC 766479
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
| |||| || || || |||||| || | ||| |||||||| || || |||||
Sbjct 766478 AAAGCTTCAAATTCTTTACCGTAACAATCAGATAAACCTGGAGCTTCATTAGGTGAAAAG 766419
Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAA 173324
| | ||||| || | | ||| || |||||||| ||
Sbjct 766418 AAAGACCAATCACCGCCAGCCTCAACTCTCTTCATAAA 766381
>seq1
Length=2480924
Score = 95.1 bits (104), Expect = 3e-14
Identities = 145/202 (72%), Gaps = 10/202 (5%)
Strand=Plus/Minus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT--AAAGC 206251
|| || || || || || |||||||| ||| ||| ||||| | || || |||||
Sbjct 1632895 ACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACTATTGACAATGTCAAAAGC 1632836
Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATCTTCGCCG 206308
|| ||||||||| || ||||||||| || || |||| || || ||||| || |
Sbjct 1632835 AA--GATTCAAGACAAGGAAGGAATTCCACCAGA---TCAACAGCGTTTGATCTTTGCTG 1632781
Query 206309 GAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTC 206368
| ||||| || ||||| ||||| |||||| | || |||||| | || || ||||||||||
Sbjct 1632780 GTAAGCAATTAGAAGACGGAAGAACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTC 1632721
Query 206369 TTCACCTTGTTTTGAGACTTCG 206390
| || | || ||| | || ||
Sbjct 1632720 TCCATTTGGTCTTGCGTCTCCG 1632699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820572868815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |