Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5 100 7e-16 seq1 95.1 3e-14 >seq5 Length=1485630 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 |||||||| || | ||||| || | |||| || | |||||| ||||||| || | Sbjct 766598 GCGTCCTTATAAAGCATGAATGGGACACCAGTTTCAGTTTGAGCTTCCAAAATAGAGTAC 766539 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 ||||||| ||| ||||| || || || ||||||||||| ||| ||||| ||||| Sbjct 766538 CAAAGTTTTTGAGCTTTCACTGTTCTTACAGCTCTTCCTTCACGTTCATATCTTTCATAC 766479 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 | |||| || || || |||||| || | ||| |||||||| || || ||||| Sbjct 766478 AAAGCTTCAAATTCTTTACCGTAACAATCAGATAAACCTGGAGCTTCATTAGGTGAAAAG 766419 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAA 173324 | | ||||| || | | ||| || |||||||| || Sbjct 766418 AAAGACCAATCACCGCCAGCCTCAACTCTCTTCATAAA 766381 >seq1 Length=2480924 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/202 (72%), Gaps = 10/202 (5%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT--AAAGC 206251 || || || || || || |||||||| ||| ||| ||||| | || || ||||| Sbjct 1632895 ACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACTATTGACAATGTCAAAAGC 1632836 Query 206252 AAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA-AGACTT--ATCTTCGCCG 206308 || ||||||||| || ||||||||| || || |||| || || ||||| || | Sbjct 1632835 AA--GATTCAAGACAAGGAAGGAATTCCACCAGA---TCAACAGCGTTTGATCTTTGCTG 1632781 Query 206309 GAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTC 206368 | ||||| || ||||| ||||| |||||| | || |||||| | || || |||||||||| Sbjct 1632780 GTAAGCAATTAGAAGACGGAAGAACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTC 1632721 Query 206369 TTCACCTTGTTTTGAGACTTCG 206390 | || | || ||| | || || Sbjct 1632720 TCCATTTGGTCTTGCGTCTCCG 1632699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820572868815