Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
>seq1
Length=2480924
Score = 107 bits (118), Expect = 2e-18
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | ||| |||||||| | ||| |||||||||||||||||| || | |
Sbjct 1632693 CCACCACGGAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 1632752
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| |||| || | |||||||| ||||| ||||| ||||| || || | |||
Sbjct 1632753 AAAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGGA 1632812
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGA-GTTG-CCACCGTGTCGCTCGATTCCA 35687
| | ||||||| | ||| | |||||| || ||| | | |||||| ||||| |
Sbjct 1632813 ATTCCTTCCTTGT-CTTGA-ATCTTGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAA 1632870
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
| |||| || || || ||||| || || || || |||||
Sbjct 1632871 CTTCCAAGGTAATAGTCTTACCAGTTAAGGTCTTAACAAA 1632910
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584
|||||||||||||| || ||||||||||| ||||| || | | ||||| ||||
Sbjct 1873476 AACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCT 1873417
Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644
|| | ||||| || ||||| || | | ||||| || | |||| | ||||||||
Sbjct 1873416 TCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCT 1873357
Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704
||||| ||| | | | | | ||||| ||||| || || | ||||| |||
Sbjct 1873356 TGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTT 1873297
Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| || || ||||| ||||||||
Sbjct 1873296 TTACCAGTCAAGGTCTTAACAAAGATCTGCAT 1873265
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584
|||||||||||||| || ||||||||||| ||||| || | | ||||| ||||
Sbjct 1873704 AACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCT 1873645
Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644
|| | ||||| || ||||| || | | ||||| || | |||| | ||||||||
Sbjct 1873644 TCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCT 1873585
Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704
||||| ||| | | | | | ||||| ||||| || || | ||||| |||
Sbjct 1873584 TGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTT 1873525
Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| || ||||| || || |||||
Sbjct 1873524 TTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873493
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584
|||||||||||||| || ||||||||||| ||||| || | | ||||| ||||
Sbjct 1873932 AACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCT 1873873
Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644
|| | ||||| || ||||| || | | ||||| || | |||| | ||||||||
Sbjct 1873872 TCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCT 1873813
Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704
||||| ||| | | | | | ||||| ||||| || || | ||||| |||
Sbjct 1873812 TGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTT 1873753
Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| || ||||| || || |||||
Sbjct 1873752 TTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873721
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584
|||||||||||||| || ||||||||||| ||||| || | | ||||| ||||
Sbjct 1874160 AACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCT 1874101
Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644
|| | ||||| || ||||| || | | ||||| || | |||| | ||||||||
Sbjct 1874100 TCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCT 1874041
Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704
||||| ||| | | | | | ||||| ||||| || || | ||||| |||
Sbjct 1874040 TGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTT 1873981
Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| || ||||| || || |||||
Sbjct 1873980 TTACCAGTCAAGGTCTTCACGAAAATTTGCAT 1873949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793515476200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |