Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq4 134 1e-26
seq1 129 6e-25
>seq4
Length=1903616
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || || || | || || || ||||||||||| ||||||||||| |
Sbjct 1735258 CCACCACGGAGACGTAAGACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGAA 1735317
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || | ||| || || ||||| |||||||| || ||||| || ||
Sbjct 1735318 AGGGTTCTTCCATCTTCCAACTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 1735377
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| |||||||| |||||||| || ||||| ||| | ||||| || || || ||
Sbjct 1735378 ATTCCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGACTCAACC 1735437
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||||||||| || ||||| || | || |||||||||||||||||
Sbjct 1735438 TCGAGAGTAATAGTCTTACCCGTAAGGGTCTTAACGAAAATTTGCAT 1735484
>seq1
Length=2480924
Score = 129 bits (142), Expect = 6e-25
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| ||||| || | || || || || |||||||||||||||||||| | |
Sbjct 1632693 CCACCACGGAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 1632752
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | ||| || | || || || ||||| ||||||||||| ||||| || ||
Sbjct 1632753 AAAGTTCTTCC-GTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGG 1632811
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || |||||||| || |||||| ||| | |||||||| ||||| ||
Sbjct 1632812 AATTCCTTCCTTGTCTTGAATCTTGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAAC 1632871
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||||| || ||||| ||||| || ||||| |||
Sbjct 1632872 TTCCAAGGTAATAGTCTTACCAGTTAAGGTCTTAACAAAA 1632911
Score = 118 bits (130), Expect = 1e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || || ||||| | |||| || |||||||||||||| ||||||||
Sbjct 1873719 CCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGAT 1873660
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | || || || ||||| || | | |||||||| || ||
Sbjct 1873659 AGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGA 1873600
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 1873599 ATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACT 1873540
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||||||||| || || || || ||||||||||||||
Sbjct 1873539 TCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873493
Score = 118 bits (130), Expect = 1e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || || ||||| | |||| || |||||||||||||| ||||||||
Sbjct 1873947 CCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGAT 1873888
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | || || || ||||| || | | |||||||| || ||
Sbjct 1873887 AGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGA 1873828
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 1873827 ATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACT 1873768
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||||||||| || || || || ||||||||||||||
Sbjct 1873767 TCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873721
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || || ||||| | |||| || |||||||||||||| ||||||||
Sbjct 1874175 CCACCTCTAAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGAT 1874116
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | || || || ||||| || | | |||||||| || ||
Sbjct 1874115 AGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGA 1874056
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 1874055 ATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACT 1873996
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || ||||||||||| || || || || ||||||||||||||
Sbjct 1873995 TCTAATGTGATGGTTTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 1873949
Score = 113 bits (124), Expect = 5e-20
Identities = 170/241 (71%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| || || ||||| | |||| || |||||||||||||| ||||||||
Sbjct 1873491 CCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGAT 1873432
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | || || || ||||| || | | |||||||| || ||
Sbjct 1873431 AGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGA 1873372
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || |||||||| || ||||| ||| | ||||| || ||||| ||
Sbjct 1873371 ATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACT 1873312
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG--TTTTTGT 134724
|| | || ||||||||||| || || || ||||| || || ||||| ||| ||||| |
Sbjct 1873311 TCTAATGTGATGGTTTTACCAGTCAAGGTCTTAACAAAGATCTGCATGTTGAATTTTTTT 1873252
Query 134725 T 134725
|
Sbjct 1873251 T 1873251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398305237800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |