Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4 134 1e-26 seq1 129 6e-25 >seq4 Length=1903616 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || || || | || || || ||||||||||| ||||||||||| | Sbjct 1735258 CCACCACGGAGACGTAAGACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGAA 1735317 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || | ||| || || ||||| |||||||| || ||||| || || Sbjct 1735318 AGGGTTCTTCCATCTTCCAACTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGAGGA 1735377 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| |||||||| || ||||| ||| | ||||| || || || || Sbjct 1735378 ATTCCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGACTCAACC 1735437 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||| || ||||| || | || ||||||||||||||||| Sbjct 1735438 TCGAGAGTAATAGTCTTACCCGTAAGGGTCTTAACGAAAATTTGCAT 1735484 >seq1 Length=2480924 Score = 129 bits (142), Expect = 6e-25 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| ||||| || | || || || || |||||||||||||||||||| | | Sbjct 1632693 CCACCACGGAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 1632752 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | ||| || | || || || ||||| ||||||||||| ||||| || || Sbjct 1632753 AAAGTTCTTCC-GTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGG 1632811 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || |||||||| || |||||| ||| | |||||||| ||||| || Sbjct 1632812 AATTCCTTCCTTGTCTTGAATCTTGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAAC 1632871 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||||| || ||||| ||||| || ||||| ||| Sbjct 1632872 TTCCAAGGTAATAGTCTTACCAGTTAAGGTCTTAACAAAA 1632911 Score = 118 bits (130), Expect = 1e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || ||||| | |||| || |||||||||||||| |||||||| Sbjct 1873719 CCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGAT 1873660 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| || | | |||||||| || || Sbjct 1873659 AGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGA 1873600 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| || ||||| ||| | ||||| || ||||| || Sbjct 1873599 ATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACT 1873540 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||||||||| || || || || |||||||||||||| Sbjct 1873539 TCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873493 Score = 118 bits (130), Expect = 1e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || ||||| | |||| || |||||||||||||| |||||||| Sbjct 1873947 CCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGAT 1873888 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| || | | |||||||| || || Sbjct 1873887 AGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGA 1873828 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| || ||||| ||| | ||||| || ||||| || Sbjct 1873827 ATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACT 1873768 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||||||||| || || || || |||||||||||||| Sbjct 1873767 TCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873721 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || ||||| | |||| || |||||||||||||| |||||||| Sbjct 1874175 CCACCTCTAAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGAT 1874116 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| || | | |||||||| || || Sbjct 1874115 AGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGA 1874056 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| || ||||| ||| | ||||| || ||||| || Sbjct 1874055 ATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACT 1873996 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||||||||| || || || || |||||||||||||| Sbjct 1873995 TCTAATGTGATGGTTTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 1873949 Score = 113 bits (124), Expect = 5e-20 Identities = 170/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || ||||| | |||| || |||||||||||||| |||||||| Sbjct 1873491 CCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGAT 1873432 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | || || || ||||| || | | |||||||| || || Sbjct 1873431 AGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGA 1873372 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| || ||||| ||| | ||||| || ||||| || Sbjct 1873371 ATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACT 1873312 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG--TTTTTGT 134724 || | || ||||||||||| || || || ||||| || || ||||| ||| ||||| | Sbjct 1873311 TCTAATGTGATGGTTTTACCAGTCAAGGTCTTAACAAAGATCTGCATGTTGAATTTTTTT 1873252 Query 134725 T 134725 | Sbjct 1873251 T 1873251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398305237800