Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 208 6e-49
seq10 96.9 3e-15
>seq2
Length=2234776
Score = 208 bits (230), Expect = 6e-49
Identities = 419/607 (69%), Gaps = 26/607 (4%)
Strand=Plus/Plus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| | || |||||| |||||||||| || ||||||||||| || ||||| |
Sbjct 2160690 AGATTTGTTCTTTTCCCAATTAAATATCATGAAATCTGGCAAATGTATAAGAAAGCTGAA 2160749
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGG--ATT 43813
|| || || ||||| |||||||| |||| || | |||| | || ||||| |
Sbjct 2160750 GCTTCCTTCTGGACTGCAGAAGAGATTGACTT-AGGAAAGGATGTTCATGATTGGGAAAA 2160808
Query 43814 GCATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
| || || |||| |||| | |||||| || || || || || ||||||||
Sbjct 2160809 CCGTTTGAATGACAATGAAAGATTTTTTATTTCAAGAGTCTTAGCTTTCTTTGCTGCATC 2160868
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA--GAAGTTCAATTACCA 43930
|| || || || ||||||||||| || || || | || ||||||||| | ||
Sbjct 2160869 TGATGGTATTGTTAATGAAAATTTAGT-AGAAAACTT-CTCAGCTGAAGTTCAACTTCCT 2160926
Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990
||||| || || ||||| || ||||| || ||||| || || || |||| |||
Sbjct 2160927 GAAGCCAAGTGCTTCTATGGTTTCCAAATCATGATGGAAAACATCCACTCTGAAACTTAC 2160986
Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATGGGCACGA--GAAGCATCGATTGTTTA--- 44045
| ||||| ||||| || ||||| || ||| | |||||| |||| ||||
Sbjct 2160987 TCCTTACTGATTGATACTTATATCAAGGA----CACAAAGGAAGCA--GATTATTTATTC 2161040
Query 44046 -ATGCGATAGAAA-CAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT 44103
|||| || |||| || | | ||| || ||||| || || || ||||| | ||||||
Sbjct 2161041 AATGCTATTGAAAACATTCCATGC-ATCAAACAAAAGGCTGAATGGGCTTTACGATGGAT 2161099
Query 44104 AAATTCAAATGATTCTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCAT 44160
||| |||| | || ||| ||| || | || || ||||| | ||| ||||| ||
Sbjct 2161100 CAATGACGATGAAGCATTGTTTGGTGAAAGATTAGTTGCCTTTGCTGCTGTTGAAGGTAT 2161159
Query 44161 TTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGG 44220
|||||| || || |||||||| | || || ||| | ||||| ||||||| ||||||||
Sbjct 2161160 TTTCTTCTCGGGCTCGTTTGCTTCTATCTTCTGGCTCAAGAAGAGAGGTTTAATGCCTGG 2161219
Query 44221 GTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280
| || || || || || || || | | |||||||| |||||| || ||||||||
Sbjct 2161220 TCTCACATTCTCTAACGAATTGATCTGCAGAGATGAAGGTTTACATACTGACTTTGCTTG 2161279
Query 44281 CTTGTTA 44287
|||||||
Sbjct 2161280 CTTGTTA 2161286
>seq10
Length=505680
Score = 96.9 bits (106), Expect = 3e-15
Identities = 119/163 (73%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 115035 GTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTCGGCT 115094
|||||||| ||||||| ||| |||||||| || || | ||||||||||| || ||||||
Sbjct 238939 GTCATACGAGAAGGAATAGCGTGCGGATTGATGATTAGATCTGGCACTAATCCTTCGGCT 238880
Query 115095 GTGAACGGCATGTCGTGCTGATCGTACATCATTCCACAAGTTCCTTTTTGAGCGGTAAAC 115154
||||| ||||| || | | ||| | || || ||| ||||| ||| || | |
Sbjct 238879 GTGAATGGCATATCTTCGTTCCTATACGTAATACCGATAGTACCTTTCTGACCGTGACGC 238820
Query 115155 GATGCAAATTTATCACCAATCTCAGGTTCTCTGATTTTTCTCA 115197
|| ||||| ||||||||||| | || | || || ||||||
Sbjct 238819 GAAGCAAACTTATCACCAATTTGGGGAACCTTGGTTGTTCTCA 238777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455927340075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |