Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 7e-17
seq11 82.4 6e-11
seq5 82.4 6e-11
>seq1
Length=2480924
Score = 102 bits (112), Expect = 7e-17
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091
|| || ||||||||||| || || || ||||||||||||||||| | | ||| || |
Sbjct 1873707 CGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTT-CGTCC 1873649
Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151
|||||| | || || || || | ||||| | || ||||| || || | ||| || ||
Sbjct 1873648 GTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTT 1873589
Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211
|| ||||| | || | | || | |||||||| | ||||||||||| || ||
Sbjct 1873588 GTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGAT 1873529
Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| ||| || |||| || ||||| || |||||||||
Sbjct 1873528 GGTTTTACCAGTCAARGTCTTCACGAAAATTTGCATA 1873492
Score = 102 bits (112), Expect = 7e-17
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091
|| || ||||||||||| || || || ||||||||||||||||| | | ||| || |
Sbjct 1873935 CGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTT-CGTCC 1873877
Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151
|||||| | || || || || | ||||| | || ||||| || || | ||| || ||
Sbjct 1873876 GTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTT 1873817
Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211
|| ||||| | || | | || | |||||||| | ||||||||||| || ||
Sbjct 1873816 GTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGAT 1873757
Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| ||| || |||| || ||||| || |||||||||
Sbjct 1873756 GGTTTTACCAGTCAARGTCTTCACGAAAATTTGCATA 1873720
Score = 100 bits (110), Expect = 2e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091
|| || ||||||||||| || || || ||||||||||||||||| | | ||| || |
Sbjct 1874163 CGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTT-CGTCC 1874105
Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151
|||||| | || || || || | ||||| | || ||||| || || | ||| || ||
Sbjct 1874104 GTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTT 1874045
Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211
|| ||||| | || | | || | |||||||| | ||||||||||| || ||
Sbjct 1874044 GTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGAT 1873985
Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
| ||| || |||| || ||||| || |||||||||
Sbjct 1873984 GGTTTTACCAGTCAAGGTCTTCACGAAAATTTGCATA 1873948
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091
|| || ||||||||||| || || || ||||||||||||||||| | | ||| || |
Sbjct 1873479 CGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTT-CGTCC 1873421
Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151
|||||| | || || || || | ||||| | || ||||| || || | ||| || ||
Sbjct 1873420 GTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTT 1873361
Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211
|| ||||| | || | | || | |||||||| | ||||||||||| || ||
Sbjct 1873360 GTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGAT 1873301
Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||| || |||| || || |||||||| |||||
Sbjct 1873300 GGTTTTACCAGTCAAGGTCTTAACAAAGATCTGCAT 1873265
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
||||| |||||||| | ||||| || |||||||| |||||||| || | | ||
Sbjct 1632705 CGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTTCCG 1632764
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
||||| | || ||||| || | || | |||||||||||| || || | || || ||
Sbjct 1632765 TCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTG 1632824
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| |||||| |||| | | || | |||||| | | ||||||||| | || |||
Sbjct 1632825 TCTTGAATCTTGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTAATA 1632884
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAA 27238
| || || || | || || |||||
Sbjct 1632885 GTCTTACCAGTTAAGGTCTTAACAAA 1632910
>seq11
Length=408711
Score = 82.4 bits (90), Expect = 6e-11
Identities = 210/314 (67%), Gaps = 13/314 (4%)
Strand=Plus/Plus
Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703
||||||| ||||||||| | || || | |||||| || || || || || | |||| |
Sbjct 180836 TTCAACTTTCTTCATAAATAGGTCGGGTATCCATAATGCATAGAAGAGGTCACGAGCTCT 180895
Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAA-AAGTCCAAAATGTCCGCATGCC 131762
| ||||||| |||| || ||||||| || | || || || || || || |||||
Sbjct 180896 TAACTCTTCTTTACC-ATGATTTTTTCTTAAGTCAAGGAATTCGAATATATCATTATGCC 180954
Query 131763 AGGGTTCCAAATACACTGCCATTGCGCC------TTTGCGCTTACCGCCTTGATTAACAT 131816
| ||||| | || | ||| | ||||| |||| || || ||||||| ||| |
Sbjct 180955 ATGGTTCAAGGTATATTGCAAAAGCGCCCGGTCTTTTG---TTTCCCCCTTGATCAACGT 181011
Query 131817 GACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATT-G 131875
| | | |||| ||| | || ||||||||||| | || || || | | | || || |
Sbjct 181012 ATCTAGCAGTGTTATTGAAAACTCGCAACATGGGAACTAACCCATTCGAGGTACCGTTAG 181071
Query 131876 GTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCG 131935
| ||||| |||||| || | | ||| || || ||||| | | || || || ||
Sbjct 181072 TTCCTCTT-ATGTAGGAACCTCTAGATCTAATATTATGAACACTTAAGCCTATTCCACCA 181130
Query 131936 CCGTATTTAGAGAT 131949
|| | || |||||
Sbjct 181131 GCGAACTTGGAGAT 181144
>seq5
Length=1485630
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/221 (68%), Gaps = 3/221 (1%)
Strand=Plus/Minus
Query 130753 ATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGG 130812
||||| |||||||| |||||||||| || | |||| ||| || || || | ||
Sbjct 767292 ATTAACAATTTGAAATTCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGG 767233
Query 130813 TTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCAC 130872
||| || |||| ||| || | ||||| | |||| ||| || ||||| || ||
Sbjct 767232 TTCGAAACATTCATTGAAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAAC 767173
Query 130873 TAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCA 130932
||| ||||| || | || || ||| | | | || || |||||| ||||||||||||
Sbjct 767172 TAAAAGAGAGTTTCTAATTCCATGCTTAGCAACTTGTCTCTTCAAAGAATCCCAATCCCA 767113
Query 130933 TAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTA 130973
|| | || ||||| | | ||| | |||||||||||
Sbjct 767112 TAAATCAGTTGGTTT---AATACCCCAAAGATCAAATTGTA 767075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934322316680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |