Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 134 2e-26 >seq5 Length=1485630 Score = 134 bits (148), Expect = 2e-26 Identities = 951/1508 (63%), Gaps = 43/1508 (3%) Strand=Plus/Minus Query 110669 TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGT 110728 || ||||| ||| ||||| || | |||||| |||||| || | || |||||| Sbjct 767291 TTAACAATTTGAAATTCACCAGCCAAAACTCTTCTAGAGTAGATATTAGAAGTATATGGT 767232 Query 110729 TCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATC 110788 || || |||||||| ||| | ||||| | || || || |||||||| || || | Sbjct 767231 TCGAAACATTCATTGAAACCAAGAATTTGAGAAGTAGATGCAGTTGGCATAGGAGCAACT 767172 Query 110789 AAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG--T 110846 |||||| ||| | || || | || | || ||| | | |||||| || | Sbjct 767171 AAAAGAGAGTTTCTAATTCCATGCTTAGCAACTTGTCTCTTCAAAGAATCCCAATCCCAT 767112 Query 110847 AGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTG-AAGCACCCCTTGGGACGCGGGA 110905 | | || ||||||| | |||| | ||||| || || ||||| | | || || Sbjct 767111 AAATCAG-TTGGTTTAATAC-CCCAAAGATCAAATTGTAATTGACCCTTAGCA-GCTGGC 767055 Query 110906 GAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGG 110965 || | | | |||| ||| | |||| || ||||| ||| || || | Sbjct 767054 GATGTTTTATAAGTTTGATAAGGTCCTTCAATTTTGGCCAAGTCAACTGAGGCTTCAACT 766995 Query 110966 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 111025 | || || || || ||||||||||| | ||||| | || |||||| ||||||| Sbjct 766994 GCAGCATGGTAAATAGTTTCAAAGATCTGGATATTCAATTGTTTAGCTTCAGGTGAATCA 766935 Query 111026 AATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGT 111085 |||| | | | ||||| |||| | |||||||| ||||| | | ||||||| Sbjct 766934 AATGGCAATCTTAATGCCATAAAGGCATCAGAAAGACCTTGGACACCAATAGCAATAGGC 766875 Query 111086 CTGTGTCGCATATTAGACT--TTCGCG-CAGTCTCAACGGGATAAAAATTTCTGTCAATG 111142 || | || | | || || | || || ||| ||| |||||| ||||||| |||||| Sbjct 766874 CTATTTCTCTTGTTGGAGTACTTGGCCTCAGG---AACAGGATAATAATTTCTATCAATG 766818 Query 111143 ACTCGGTTTAGATTTTTGGTAACAAT--CTTTGTGATTTCATGAAGTTTTTCATAATC-- 111198 | | ||| | ||| | | | ||| ||| |||| |||||| | ||| ||| |||| Sbjct 766817 ATTTTGTTCAAATTAT--GAACCAAGACCTTAGTGACTTCATGTAATTTCTCAAAATCGT 766760 Query 111199 ---AAAAGTGCG-AGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGC 111254 || | | | | || || | ||| | | || | || | || |||||||| | Sbjct 766759 ACCAACCCTTCTTACTATCACCAGTAACAAAAGTAGGTAAAGCAAGAGAAGCCAAATTAC 766700 Query 111255 AAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC- 111313 | ||||| ||||| | | ||| || | |||||| ||||| || ||| Sbjct 766699 ATACAGCAACTTCATCAGGAGAAGAGTATTCAACAATTTCACAGCATAAATT---ACTTG 766643 Query 111314 --TTAATCGTCCCCAA-ATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGC 111370 || || | | |||| ||||||||| || ||||| || || || ||||| || ||| Sbjct 766642 ATTTGAT-GACACCAAGATTCTTTTGATTGGACTTCTCATTACAAGCGTCCTTATAAAGC 766584 Query 111371 ATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCGGCT 111430 ||| | || || || || || || | || | ||||| | ||||| | ||| Sbjct 766583 ATGAATGGGACACCAGTTTCAGTTTGAGCTTCCAAAATAGAGTACCAAAGTTTTTGAGCT 766524 Query 111431 GGTACAATGGCGTTG--GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488 | || || || || | ||| || || || || || | |||||||| | Sbjct 766523 --TTCACTGTTCTTACAGCTCTTCCTTCACGTTCATATCTTTCATACAAAGCTTCAAATT 766466 Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548 | | ||| || || | |||||| || | | || | || | |||||| | || Sbjct 766465 CTTTACCGTAACAATCAGATAAACCTGGAGCTTCATTAGGTGAAAAGAAAGACCAATCAC 766406 Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608 | || ||||||| | |||||| || | || |||||| | || ||| | ||||| Sbjct 766405 CGCCAGCCTCAACTCTCTTCATAAATAAATCACTAATCCATAAGGCAACAAATAAATCTC 766346 Query 111609 TA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 | | | || ||||| | || || || || | |||| ||| || | |||||| Sbjct 766345 TGGCTCTGATT-TCTTCTTTTCCGTGATTCTTTCTCACGTCAATGAAATCAAAGATATCA 766287 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTT 111724 | ||||| || || | || | |||| || || || | ||| |||| | Sbjct 766286 GGATGCCAAGGTTCTAAGTATAAAGCGAAAGCACCAGGGCGTTTATTACCACCTTGGTCC 766227 Query 111725 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 111784 ||||| | || ||| ||| || || || | ||| || |||||||||| ||| || Sbjct 766226 ACATATCTAGCAGTGTTGTTGAAAACACGCATCATGGGGATAATACCATTAGATGTTCCG 766167 Query 111785 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 111844 || || || |||| ||| | | | ||| | || |||||| || | |||||||| Sbjct 766166 TTAGTACCAGCAATATAAGAACCAGTTGATCTAATATTATGGATATGTAAACCAATACCA 766107 Query 111845 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 111904 ||||| ||| || || ||||| ||||||| | || || || | ||||| Sbjct 766106 CCAGCAGTCTTGGAAATCAATGCACATGTTTTAAGAGTATCGTAAATGCCTTCAATTGAA 766047 Query 111905 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTG 111964 || ||||| |||| | | ||| ||| ||||| || ||| |||||||||||||| Sbjct 766046 TCTTCCTTCATGGCAACCAAGAAACAAGAAGACATTTGAGGTTGAGGTGTACCAGCATTA 765987 Query 111965 AAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAA 112023 || | || |||| ||| ||| |||| |||| | |||||| | || || | | Sbjct 765986 AACAAAGTAGGTGATGCATGAGTGAA-ATACTTCAAAGACATCAAATTATAAGTTTTGAT 765928 Query 112024 GACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 ||| ||||||||| || || || || || | || || | ||| | ||||| ||| || Sbjct 765927 AACATTATCAATGTCATCGCCATGAATACCAACAGCAACTCTCATAATCATGTGCTGGGG 765868 Query 112084 GGTTTCCATGAGGATGCCATCGAGCCGTTGAAGAT-AGCTCTTCTCAAGGGTTTTGAGAC 112142 |||| || ||||||| | | | | || || || ||| | ||||||| || Sbjct 765867 TCTTTCAGCGACTTTGCCATCTACTCTTAATAAATAAGATC-GCTCTAATGTTTTGAAAC 765809 Query 112143 CAAAGTAA 112150 |||||||| Sbjct 765808 CAAAGTAA 765801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031882244000