Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 167 3e-36 >seq5 Length=1485630 Score = 167 bits (184), Expect = 3e-36 Identities = 1109/1755 (63%), Gaps = 59/1755 (3%) Strand=Plus/Plus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| || ||| ||||| | ||| | || || | ||||||||||| || ||||||||| Sbjct 765862 GAAAGACCCCAGCACATGATTATGAGAGTTGCTGTTGGTATTCATGGCGATGACATTGAT 765921 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 104334 ||| | | || || | |||||| | |||| |||| ||| ||| |||| || Sbjct 765922 AATGTTATCAAAACTTATAATTTGATGTCTTTGAAGTAT-TTCACTCATGCATCACCTAC 765980 Query 104335 CCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAA 104394 | || |||||||||||||| ||| |||||||| ||| ||| | | |||| || Sbjct 765981 TTTGTTTAATGCTGGTACACCTCAACCTCAAATGTCTTCTTGTTTCTTGGTTGCCATGAA 766040 Query 104395 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 104454 ||| || ||||| | || || || | ||||||| ||||| || || ||| Sbjct 766041 GGAAGATTCAATTGAAGGCATTTACGATACTCTTAAAACATGTGCATTGATTTCCAAGAC 766100 Query 104455 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 104514 ||||| |||||||| | || |||||| || | ||| | | | ||| |||| || Sbjct 766101 TGCTGGTGGTATTGGTTTACATATCCATAATATTAGATCAACTGGTTCTTATATTGCTGG 766160 Query 104515 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 104574 || || || ||| |||||||||| || ||| | || || || ||| ||| || | Sbjct 766161 TACTAACGGAACATCTAATGGTATTATCCCCATGATGCGTGTTTTCAACAACACTGCTAG 766220 Query 104575 CTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 ||||| | |||| ||| | || || || |||| | || | || || || Sbjct 766221 ATATGTGGACCAAGGTGGTAATAAACGCCCTGGTGCTTTCGCTTTATACTTAGAACCTTG 766280 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 ||| | |||||| | || ||| |||| || | || || || | || || | Sbjct 766281 GCATCCTGATATCTTTGATTTCATTGACGTGAGAAAGAATCACGGAAAAGAAGA-AATCA 766339 Query 104692 GTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | ||| | ||| | || || | |||||| ||| | || |||||||||||||||| Sbjct 766340 GAGCCAGAGATTTATTTGTTGCCTTATGGATTAGTGATTTATTTATGAAGAGAGTTGAGG 766399 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 | || |||||||| |||||| || | | || || ||| | || ||| | Sbjct 766400 CTGGCGGTGATTGGTCTTTCTTTTCACCTAATGAAGCTCCAGGTTTATCTGATTGTTACG 766459 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 || | || |||||||| | || || || || ||||| | || || | Sbjct 766460 GTAAAGAATTTGAAGCTTTGTATGAAAGATATGAACGTGAAGGAAGAGCTGTAAGAACAG 766519 Query 104871 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 || |||| | | ||| | ||||| | | ||||||| || |||||| |||| Sbjct 766520 TGAAAGCTCAAAAACTTTGGTACTCTATTTTGGAAGCTCAAACTGAAACTGGTGTCCCAT 766579 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 ||||||||| || ||||| ||||| | ||| |||||||||||| | ||||| |||| Sbjct 766580 TCATGCTTTATAAGGACGCTTGTAATGAGAAGTCCAATCAAAAGAATCTTGGTGTCATCA 766639 Query 104991 A---GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 | ||| ||| | || ||||| | |||| | ||||| |||| Sbjct 766640 AATCAAGT---AATTTATGCTGTGAAATTGTTGAATACTCTTCTCCTGATGAAGTTGCTG 766696 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA------ 105101 | ||||| | || || | ||| | || | | ||| | || | |||| Sbjct 766697 TATGTAATTTGGCTTCTCTTGCTTTACCTACTTTTGTTACTGGTGATAGTAAGAAGGGTT 766756 Query 105102 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 | |||| ||| ||| | || ||||| || || | | || | |||| | Sbjct 766757 GGTACGATTTTGAGAAATTACATGAAGTCACTAAGGTCTTGGTTCATAATTTGAACAAAA 766816 Query 105162 TTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACC 105218 | ||||||||||||| ||| || || |||| | | || | || || | |||| | Sbjct 766817 TCATTGATAGAAATTATTATCCTGTTCCTGAGGC--CAAGT-ACTCCAACAAGAGAAATA 766873 Query 105219 GTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTT---GTCGCCAC 105274 | || |||| | | ||||| || ||||| | |||| || || | || | || Sbjct 766874 GGCCTATTGCTATTGGTGTCCAAGGTCTTTCTGATGCCTTTATGGCATTAAGATTGC--- 766930 Query 105275 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCAC 105334 |||||||||| ||||| || || | ||| | || ||||| || || || || Sbjct 766931 -CATTTGATTCACCTGAAGCTAAACAATTGAATATCCAGATCTTTGAAACTATTTACCAT 766989 Query 105335 GCCGCTCTTGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 105392 || || |||| || |||| || ||||| | |||| || || ||| |||| | | Sbjct 766990 GCTGCAGTTGAAGCCTCAGTT--GACTTGGCCAAAATTGAAGGACCTTATCAAACTTATA 767047 Query 105393 AGGGTTCTCCAGCTTCACAAGGGGTGCTT-CAATTTGATATGTGGGAAGGTGAGACCAA- 105450 | || |||||| | ||||| || ||||||||| | |||| | | ||||| Sbjct 767048 AAACATCGCCAGCTGC-TAAGGGTCAATTACAATTTGATCTTTGGG-GTATTAAACCAAC 767105 Query 105451 -GCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 105509 | || | | || ||||| || | ||| || | || | || || | ||| Sbjct 767106 TGATTTA-TGGGATTGGGATTCTTTGAAGAGACAAGTTGCTAAGCATGGAATTAGAAACT 767164 Query 105510 GTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAAT 105569 ||| | | ||||| |||||||| || || || | ||||| | ||| ||||||| Sbjct 767165 CTCTTTTAGTTGCTCCTATGCCAACTGCATCTACTTCTCAAATTCTTGGTTTCAATGAAT 767224 Query 105570 GCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTG 105628 | || ||||| || || | || ||||| ||| |||||| | || || || ||| Sbjct 767225 GTTTCGAACCATATACTTCTAATATCTACTCT-AGAAGAGTTTTGGCTGGTGAATTTCAA 767283 Query 105629 ATTGTCAA-CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTC-TCTGGTCCAAGGATA 105686 ||||| || | | | | | | ||||| || ||||| | | ||| | || Sbjct 767284 ATTGTTAATCCATGGT-TACTTAAGGACCTTGTTGA-ATTGGGCATTTGGGATGATTCTA 767341 Query 105687 TGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATATTGTGGATATTCCAA 105743 ||||| | || | | | || | ||| || |||||||||||| | ||||||| Sbjct 767342 TGAAGAA---CAAGATTATCGCTGATAATGGCTCTATTCAAAATATTACAAACATTCCAA 767398 Query 105744 ATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACA 105803 | ||| | ||| | |||||| || |||||| | ||| | | ||||| | Sbjct 767399 AGGAATTGAAGGAATTGTACAAAACTACATGGGAATTATCTCAGAAAGTCATTATTGATA 767458 Query 105804 TGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGA 105861 |||| || || | |||| |||||||||||| ||| ||| |||||| ||| ||| Sbjct 767459 TGGCTGCTGACAGAGGTCCATTCATTGATCAA--TCACAGTCAATGAATATCTACATTAG 767516 Query 105862 AAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAA 105921 | ||||| ||| ||||| || ||||||| | ||| ||||||| |||||||| || Sbjct 767517 AGAACCAACCATGAAAAAGCTTACTGCTATGCATTTCTACGGTTGGAAAAAGGGTCTTAA 767576 Query 105922 AACGGGGATGTATTA 105936 || || ||||| || Sbjct 767577 GACTGGTATGTACTA 767591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260690638600