Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2 82.4 8e-11
>seq2
Length=2234776
Score = 82.4 bits (90), Expect = 8e-11
Identities = 145/211 (69%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810
||||| || ||| | ||||||||||||| |||||||| || || || | || |||
Sbjct 2161276 GCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGTGAGACCA 2161217
Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870
||||| | || | |||||| | ||| ||||| | | || || || |||||| ||
Sbjct 2161216 GGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGAAGAAAATA 2161157
Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC---GGTGCATCGGAAGTCATC 74927
||||| ||| |||||||| || | | || | ||| | | ||||| | | |||
Sbjct 2161156 CCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTTCATCGTCATTGATC 2161097
Query 74928 CAAGTCTGAGCCCATTCAGCTTTTCGTTTGA 74958
|| |||||||||||| ||| ||||||
Sbjct 2161096 CATCGTAAAGCCCATTCAGCCTTTTGTTTGA 2161066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215897397000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |