Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 8e-11 >seq2 Length=2234776 Score = 82.4 bits (90), Expect = 8e-11 Identities = 145/211 (69%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || ||| | ||||||||||||| |||||||| || || || | || ||| Sbjct 2161276 GCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGTGAGACCA 2161217 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| | || | |||||| | ||| ||||| | | || || || |||||| || Sbjct 2161216 GGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGAAGAAAATA 2161157 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC---GGTGCATCGGAAGTCATC 74927 ||||| ||| |||||||| || | | || | ||| | | ||||| | | ||| Sbjct 2161156 CCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTTCATCGTCATTGATC 2161097 Query 74928 CAAGTCTGAGCCCATTCAGCTTTTCGTTTGA 74958 || |||||||||||| ||| |||||| Sbjct 2161096 CATCGTAAAGCCCATTCAGCCTTTTGTTTGA 2161066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215897397000