Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 2e-29
seq4 132 1e-25
>seq1
Length=2480924
Score = 145 bits (160), Expect = 2e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||| ||||| | |||||| || | | ||||| || ||||||| ||||| |||
Sbjct 1873689 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCA 1873630
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| ||||| |||| ||| || || || |||||||||||||||||||| ||||| |||
Sbjct 1873629 GCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTG 1873570
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| || || |||||||| | ||| || ||||| ||||| || || || ||||| ||
Sbjct 1873569 ACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARGTC 1873510
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 1873509 TTCACGAAAATTTGCAT 1873493
Score = 145 bits (160), Expect = 2e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||| ||||| | |||||| || | | ||||| || ||||||| ||||| |||
Sbjct 1873917 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCA 1873858
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| ||||| |||| ||| || || || |||||||||||||||||||| ||||| |||
Sbjct 1873857 GCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTG 1873798
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| || || |||||||| | ||| || ||||| ||||| || || || ||||| ||
Sbjct 1873797 ACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARGTC 1873738
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 1873737 TTCACGAAAATTTGCAT 1873721
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||| ||||| | |||||| || | | ||||| || ||||||| ||||| |||
Sbjct 1874145 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCA 1874086
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| ||||| |||| ||| || || || |||||||||||||||||||| ||||| |||
Sbjct 1874085 GCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTG 1874026
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| || || |||||||| | ||| || ||||| ||||| || || || ||||| ||
Sbjct 1874025 ACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAAGGTC 1873966
Query 225697 TTTATGAACACTTGCAT 225713
|| | ||| | ||||||
Sbjct 1873965 TTCACGAAAATTTGCAT 1873949
Score = 136 bits (150), Expect = 9e-27
Identities = 150/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| ||||| ||||| | |||||| || | | ||||| || ||||||| ||||| |||
Sbjct 1873461 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTTCCA 1873402
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|| ||||| |||| ||| || || || |||||||||||||||||||| ||||| |||
Sbjct 1873401 GCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCTTG 1873342
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
||| || || |||||||| | ||| || ||||| ||||| || || || ||||| ||
Sbjct 1873341 ACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAAGGTC 1873282
Query 225697 TTTATGAACACTTGCATTTT 225716
|| | || | ||||| ||
Sbjct 1873281 TTAACAAAGATCTGCATGTT 1873262
Score = 125 bits (138), Expect = 2e-23
Identities = 152/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || ||| | |||||||| || || ||||| | ||||| || | ||||||
Sbjct 1632698 ACGGAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 1632757
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
||| || ||||||| ||||| ||||| ||||| | || ||||| || || ||||| ||
Sbjct 1632758 TCTTCCGTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCC 1632817
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||| ||||| || ||| || || ||||| || | ||| || || ||
Sbjct 1632818 TTCCTTGTCTTGAATCTTGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAA 1632877
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| || ||||| || || || || ||
Sbjct 1632878 GGTAATAGTCTTACCAGTTAAGGTCTT 1632904
Score = 104 bits (114), Expect = 6e-17
Identities = 86/105 (82%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||||||||| || || ||||| ||||| ||||||||||| ||||||||
Sbjct 1309457 GAAAATTTGACCATCAGTAATGGAAATGACATTGGTAGGAATATAAGCAGAGACATCACC 1309516
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||| | |||||||| || || | ||| || |||||
Sbjct 1309517 ACCTTGAGTTTCAATGACAGGTAAAGCAGTCAATGAACCGCCACC 1309561
>seq4
Length=1903616
Score = 132 bits (146), Expect = 1e-25
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570
||||| || ||||| ||||||| ||||| || | | ||||| |||||||| | ||||
Sbjct 1735282 TGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTTCCATCTTCCAACTGC 1735341
Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630
|| ||||| ||||| | |||||||| || || ||||| ||||| |||||||| |||||
Sbjct 1735342 TTACCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCTTGAATCTTA 1735401
Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690
||| ||| || ||||||||||| | || || || | || || ||||| |||||
Sbjct 1735402 GACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATAGTCTTACCCGTA 1735461
Query 225691 AAAGTTTTTATGAACACTTGCAT 225713
| || || | ||| | ||||||
Sbjct 1735462 AGGGTCTTAACGAAAATTTGCAT 1735484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530970810410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |