Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq2 309 3e-79
>seq2
Length=2234776
Score = 309 bits (342), Expect = 3e-79
Identities = 616/905 (68%), Gaps = 13/905 (1%)
Strand=Plus/Minus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| ||||| || || || |||| ||||||||||||||||||||| || | ||
Sbjct 2161580 AACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGCCAA 2161521
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAA---TGTTTTTCACACTT 4363
|| ||||||||||| || ||||| ||||| | | ||||||| | || | | |
Sbjct 2161520 AGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAACCTTCTTGTTGCCC-- 2161463
Query 4364 TAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTT 4423
| ||| | ||| |||| || || |||||||| | |||||| | |||||| | ||||||
Sbjct 2161462 -AAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGCAGTT 2161404
Query 4424 AATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGC 4483
|| || | ||| ||||| | || | || || | | | ||| || || ||
Sbjct 2161403 CATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGACAGC 2161344
Query 4484 TTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAA 4543
||| || || || | || | || | ||| | || || | || ||
Sbjct 2161343 TTCAGTAATGATCTTTTCAACAATAACAGCGTCAGGTCTGTTGTTCAAATGAGAGAATAA 2161284
Query 4544 TAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGT 4603
|| || ||||| ||| ||| |||||||| ||||||| |||| ||||||||| || ||
Sbjct 2161283 CAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAGAGAATGT 2161224
Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663
| || ||||||||||||||||| || ||||| || |||| ||||| || || || ||
Sbjct 2161223 GAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGCCCGAGAA 2161164
Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA-GCTGGCTTTGT 4722
||| || ||||| || || ||||| || ||||||| || ||| | ||| | | ||
Sbjct 2161163 GAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCT-TCATCGT 2161105
Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782
| || |||||| ||| ||||| | ||| |||| || | ||| ||||| | | ||||
Sbjct 2161104 CATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTTCAATAG 2161045
Query 4783 CGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842
| || ||||| | | | ||| || ||| | |||||||| || || |||| | |
Sbjct 2161044 CATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAGTAAGGAGT 2160985
Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902
| ||||||| || || ||||| || || || || || || ||||| | ||||| |
Sbjct 2160984 AAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGGCTTCAG 2160925
Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962
| ||||||||| | || |||||||||| ||||| || || ||||| ||| |
Sbjct 2160924 GAAGTTGAACTTCAGCTGAGAAGTTTTCTACTAAATTTTCATTAACAATACCATCAGATG 2160865
Query 4963 CTGCAAAAAACGCCAAAA--CATGAGATATAAAGTACTGT--TCGTCAGGCTTAAGTTTT 5018
| ||||| || || || | | ||| ||| ||| | || | | |||| | | | |||
Sbjct 2160864 CAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAAT-CTTTCATTGTCATTCAAACGGTTT 2160806
Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCC 5078
| ||| | | | ||| || ||| |||| ||||| ||||||| || || |||||
Sbjct 2160805 TCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAAGCTTCA 2160746
Query 5079 GCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTTG 5138
||||| || ||||| ||| || ||| |||| | ||| || | | |||||||| ||
Sbjct 2160745 GCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAATCTTTTA 2160686
Query 5139 TCGTT 5143
|||||
Sbjct 2160685 TCGTT 2160681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049521929995
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |