Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4 109 1e-18
seq1 105 2e-17
>seq4
Length=1903616
Score = 109 bits (120), Expect = 1e-18
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| | ||| || || || || |||||||||||||| || | | ||||| ||||||||
Sbjct 1735275 GACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGAAAGGGTTCTTCCATCTTC 1735334
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| || || || ||||| | | || || || | | |||||||| || |||||
Sbjct 1735335 CAACTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATTCCTTCTTTGTCTTG 1735394
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
||| || |||||| | || | | |||||||| ||| || || ||||||||||| ||
Sbjct 1735395 AATCTTAGACTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATAGTCTT 1735454
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || ||||| ||||| | |||||
Sbjct 1735455 ACCCGTAAGGGTCTTAACGAAAATTTGCAT 1735484
>seq1
Length=2480924
Score = 105 bits (116), Expect = 2e-17
Identities = 144/201 (72%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954
||| | ||| ||||||||||| ||||| |||||||| || | |||||||| || |||||
Sbjct 1632710 GACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTTCCGTCTTC 1632769
Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
|| || || || ||||| | | ||| || || | | ||||||||||| |||||
Sbjct 1632770 TAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGGAATTCCTTCCTTGTCTTG 1632829
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
||| || ||||||| | || | |||| ||| || ||||| | |||||||| ||
Sbjct 1632830 AATCTTGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAACTTCCAAGGTAATAGTCTT 1632889
Query 152075 GCCCGTGAGAGTCTTCACGAA 152095
|| || | ||||| || ||
Sbjct 1632890 ACCAGTTAAGGTCTTAACAAA 1632910
Score = 89.7 bits (98), Expect = 1e-12
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965
|| || || ||||| || ||||| || | || ||||| || ||||||| ||||| |
Sbjct 1873689 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTT--C 1873632
Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025
| || ||||| || || ||||| || | | || |||||||| |||||||| || |
Sbjct 1873631 CAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCT 1873572
Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085
||||| | || | ||||||| || ||||| | || || ||||| || || | |
Sbjct 1873571 TGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARG 1873512
Query 152086 TCTTCACGAAGACCTGCAT 152104
|||||||||| | |||||
Sbjct 1873511 TCTTCACGAAAATTTGCAT 1873493
Score = 89.7 bits (98), Expect = 1e-12
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965
|| || || ||||| || ||||| || | || ||||| || ||||||| ||||| |
Sbjct 1873917 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTT--C 1873860
Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025
| || ||||| || || ||||| || | | || |||||||| |||||||| || |
Sbjct 1873859 CAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCT 1873800
Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085
||||| | || | ||||||| || ||||| | || || ||||| || || | |
Sbjct 1873799 TGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAARG 1873740
Query 152086 TCTTCACGAAGACCTGCAT 152104
|||||||||| | |||||
Sbjct 1873739 TCTTCACGAAAATTTGCAT 1873721
Score = 87.8 bits (96), Expect = 4e-12
Identities = 140/199 (70%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965
|| || || ||||| || ||||| || | || ||||| || ||||||| ||||| |
Sbjct 1874145 GTTGATTCCTTTTGAATATTGTAGTCCGATAGAGTTCGTCCGTCTTCTAATTGCTTT--C 1874088
Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025
| || ||||| || || ||||| || | | || |||||||| |||||||| || |
Sbjct 1874087 CAGCAAAGATGAGTCTTTGCTGATCTGGTGGAATACCTTCCTTGTCTTGAATCTTACTCT 1874028
Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085
||||| | || | ||||||| || ||||| | || || ||||| || || | |
Sbjct 1874027 TGACATTGTCAATAGTGTCTGATGATTCAACTTCTAATGTGATGGTTTTACCAGTCAAGG 1873968
Query 152086 TCTTCACGAAGACCTGCAT 152104
|||||||||| | |||||
Sbjct 1873967 TCTTCACGAAAATTTGCAT 1873949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820578250065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |