Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq4 163 6e-35
seq1 141 2e-28
seq10 98.7 2e-15
>seq4
Length=1903616
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || | |||| ||| | || ||| |||||||||||||||||||
Sbjct 1735257 ACCACCACGGAGACGTAAGACCAAATGGAGGGTCGATTCCTTTTGGATGTTGTAGTCAGA 1735316
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || | ||||| || | || || || |||||||||||||||||||| || ||
Sbjct 1735317 AAGGGTTCTTCCATCTTCCAACTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGAGG 1735376
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || || |||||||| ||||| | || || | || || ||||| |||| || ||
Sbjct 1735377 AATTCCTTCTTTGTCTTGAATCTTAGACTTGACATTGTCAATGGTGTCTGAAGACTCAAC 1735436
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||||||| || ||||||||||| | ||||||||||| || |||||
Sbjct 1735437 CTCGAGAGTAATAGTCTTACCCGTAAGGGTCTTAACGAAAATTTGCAT 1735484
>seq1
Length=2480924
Score = 141 bits (156), Expect = 2e-28
Identities = 165/220 (75%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || | |||| ||| | || || ||||| |||||||||||||
Sbjct 1632692 ACCACCACGGAGACGCAAGACCAAATGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 1632751
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | || || |||| ||| || || |||||||||||||| ||||| || ||
Sbjct 1632752 CAAAGTTCTTCCGTCTTCTAATTGCTTACCAGCAAAGATCAAACGCTGTTGATCTGGTGG 1632811
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || ||||||||||| ||| |||||||| || | || |||||||| |||| ||| |
Sbjct 1632812 AATTCCTTCCTTGTCTTGAATC-TTGCTTTTGACATTGTCAATAGTGTCGGAAGATTCAA 1632870
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|||| | || || |||||||| || || |||||||| ||
Sbjct 1632871 CTTCCAAGGTAATAGTCTTACCAGTTAAGGTCTTAACAAA 1632910
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || || | |||| |||||| || ||| ||||| || |||||||| |
Sbjct 1873492 ACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGA 1873433
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || || |||| ||| || || |||||||| | | ||| || || ||
Sbjct 1873432 TAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGG 1873373
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| ||||||||||| ||||| || || | || |||||||| || | ||| ||
Sbjct 1873372 AATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAAC 1873313
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||| | ||||| || ||||| ||||| |||||||| || |||||||| ||
Sbjct 1873312 TTCTAATGTGATGGTTTTACCAGTCAAGGTCTTAACAAAGATCTGCATGTT 1873262
Score = 134 bits (148), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || || | |||| |||||| || ||| ||||| || |||||||| |
Sbjct 1873720 ACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGA 1873661
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || || |||| ||| || || |||||||| | | ||| || || ||
Sbjct 1873660 TAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGG 1873601
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| ||||||||||| ||||| || || | || |||||||| || | ||| ||
Sbjct 1873600 AATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAAC 1873541
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | ||||| || ||||| ||||| ||||| ||||| || |||||
Sbjct 1873540 TTCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873493
Score = 134 bits (148), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| | || || | |||| |||||| || ||| ||||| || |||||||| |
Sbjct 1873948 ACCACCTCTTAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCGA 1873889
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || || |||| ||| || || |||||||| | | ||| || || ||
Sbjct 1873888 TAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTGG 1873829
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||| ||||||||||| ||||| || || | || |||||||| || | ||| ||
Sbjct 1873828 AATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAAC 1873769
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| | ||||| || ||||| ||||| ||||| ||||| || |||||
Sbjct 1873768 TTCTAATGTGATGGTTTTACCAGTCAARGTCTTCACGAAAATTTGCAT 1873721
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930
||||||| | || || | |||| |||||| || ||| ||||| || |||||||| |
Sbjct 1874177 AACCACCTCTAAGACGTAACACCAAATGTAATGTTGATTCCTTTTGAATATTGTAGTCCG 1874118
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|| || || || || |||| ||| || || |||||||| | | ||| || || |
Sbjct 1874117 ATAGAGTTCGTCCGTCTTCTAATTGCTTTCCAGCAAAGATGAGTCTTTGCTGATCTGGTG 1874058
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||||| ||||||||||| ||||| || || | || |||||||| || | ||| |
Sbjct 1874057 GAATACCTTCCTTGTCTTGAATCTTACTCTTGACATTGTCAATAGTGTCTGATGATTCAA 1873998
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| | ||||| || ||||| ||||| ||||| ||||| || |||||
Sbjct 1873997 CTTCTAATGTGATGGTTTTACCAGTCAAGGTCTTCACGAAAATTTGCAT 1873949
>seq10
Length=505680
Score = 98.7 bits (108), Expect = 2e-15
Identities = 152/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 316980 TCCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAAT-ATCCTTCGTCGGGAACCCTT 317038
|||||| | ||| || || ||||| ||||| | | | ||| | || ||||| ||||
Sbjct 76087 TCCGTCAATGTCGTGTTCGACATAGACAGTTCG-ACATTCATCTTGGGTAGGGAAACCTT 76029
Query 317039 CCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGC 317098
| | ||||| || |||| || ||||||| ||| ||||| || | ||| || || ||||
Sbjct 76028 CGACTTGACCATTAGCAATGGCTCTCATCAATGTAGACTTACCGGAACCGTTAGGACCGC 75969
Query 317099 AAAGACCATACCGATTTCC-CTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTA 317157
||||||| || | | || |||| ||| | || | || |||||| | ||||||
Sbjct 75968 AAAGACCGTATCTTCTACCTCTTC-TCAATCTTAATTGAGTTCTGTTCAACAAGATCTTA 75910
Query 317158 CCACCATATGCCAGAGAGAACTCACAATCACA 317189
||||||| |||| |||||||||||| | |||
Sbjct 75909 GCACCATAAGCCAAAGAGAACTCACAGTTACA 75878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738998829810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |