Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2 288 1e-72 >seq2 Length=2234776 Score = 288 bits (318), Expect = 1e-72 Identities = 609/902 (68%), Gaps = 19/902 (2%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| |||||||| || ||| | ||||||| ||||| || ||||| | Sbjct 2161583 CATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCGAAGAAATTAGTTTTACCAGC 2161524 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 || || ||||||||||| || ||||||||||| |||| || || || ||| | || Sbjct 2161523 CAAAGAGATATTTTCCATGAAGTCAAATGGATTGGAAGAGTTGTAAAC--CTT--CTTGT 2161468 Query 23325 T----AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCAT 23380 | || | | | |||||||| |||||||||| ||| |||||||| | | Sbjct 2161467 TGCCCAAAGCAAGAAGTAATCTATCTGCAACAAATTCAACATACTGACACATGAGCTTGC 2161408 Query 23381 AGTTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAA 23440 |||| ||||||| || || || | ||||| ||| | ||||| || | Sbjct 2161407 AGTTCATACCTAATAAAGAGACAGGCAAAGCATCGGTGAAGTAGCCCTTTTCGATTTCGA 2161348 Query 23441 CAGCATCTTTAATTAT---TTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACT 23497 |||| || |||| || || ||||||||| | ||| ||| | || |||| Sbjct 2161347 CAGCTTCAGTAATGATCTTTTCAACAATAACAGCGTCA---GGTCTGTTGTTCAAATGAG 2161291 Query 23498 TAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAG 23557 || || || || ||||| ||| ||||| |||||||| || | |||||||| |||| Sbjct 2161290 AGAATAACAAGCAAGCAAAGTCAGTATGTAAACCTTCATCTCTGCAGATCAATTCGTTAG 2161231 Query 23558 AAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATC 23617 | ||||| | || |||||||| |||| || || | ||| || || | |||||| || | Sbjct 2161230 AGAATGTGAGACCAGGCATTAAACCTCTCTTCTTGAGCCAGAAGATAGAAGCAAACGAGC 2161171 Query 23618 CGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCAT 23677 | || ||||||||||| |||||||| |||||||| || | | | |||||| ||| | Sbjct 2161170 CCGAGAAGAAAATACCTTCAACAGCAGCAAAGGCAACTAATCTTTCACCAAACAATGCTT 2161111 Query 23678 TATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTT 23737 || ||| |||||| | | ||| | |||||| ||| | || ||| ||| Sbjct 2161110 CATCGTCATTGATCCATCGTAAAGCCCATTCAGCCTTTTGTTTGATGCATGGAATGTTTT 2161051 Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 |||| || || || | | || | ||| | | || | ||||| |||||||| |||| Sbjct 2161050 CAATAGCATTGAATAAATAATCTGCTTCCTTTGTGTCCTTGATATAAGTATCAATCAGTA 2160991 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 | || ||||||| || || ||||| || || || || ||||| || || | | Sbjct 2160990 AGGAGTAAGTTTCAGAGTGGATGTTTTCCATCATGATTTGGAAACCATAGAAGCACTTGG 2160931 Query 23858 CTTCAGACAATTGAACATCAT-TAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916 |||||| | |||||| ||| | | || | || || |||||||||| |||||||||||| Sbjct 2160930 CTTCAGGAAGTTGAACTTCAGCTGAGAAGTTTTCTA-CTAAATTTTCATTAACAATACCA 2160872 Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGAT 23973 ||| |||||||||||||| | || | |||||| ||||||| ||| | | Sbjct 2160871 TCAGATGCAGCAAAGAAAGCTAAGACTCTTGAAATAAAAAATCTTTCATTGTCATTCAAA 2160812 Query 23974 AATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTT 24033 |||| |||||||| || ||| ||| ||| |||| || || | ||||| || Sbjct 2160811 CGGTTTTCCCAATCATGAACATCCTTTCCTAAGTCAATCTCTTCTGCAGTCCAGAAGGAA 2160752 Query 24034 GCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAAT 24093 || || |||||||||| |||| || |||| || || ||||| || | || ||| Sbjct 2160751 GCTTCAGCTTTCTTATACATTTGCCAGATTTCATGATATTTAATTGGGAAAAGAACAAAT 2160692 Query 24094 CT 24095 || Sbjct 2160691 CT 2160690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487902221000