Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016- 03-01] 15 sequences; 16,411,463 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq7 104 3e-17 >seq7 Length=1328185 Score = 104 bits (114), Expect = 3e-17 Identities = 295/451 (65%), Gaps = 33/451 (7%) Strand=Plus/Plus Query 50475 GGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAAAT 50534 ||||| ||||| |||||||| || ||||||||| | |||||||| || || | || Sbjct 1157946 GGAGACTTAGGGCCTGTTTATGGGTTTCAATGGCGTCATTTTGGTGCTGAATATACGGAT 1158005 Query 50535 TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACT-GCAAAAA--ATT-ATAACGAC 50590 ||||||| | ||| ||| ||||||| |||||| | || | ||| |||| Sbjct 1158006 TGCGACGCCGACTACACAGGCAAAGGCGTTGATCAATTAGCTGATGTCATTCATAA---- 1158061 Query 50591 GTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATAT 50650 | | || || || || | ||| || | ||| | | | || ||||| |||| ||| | Sbjct 1158062 GCTTAAGACTAATCCTTATGATAGGAGAATTATTTTCAGTGCTTGGAACCCAAAGGATTT 1158121 Query 50651 AGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGAC---AA 50707 ||| | | |||| || |||||| |||| |||||| |||| | || || Sbjct 1158122 CCCAAAAATGGCTCTACCCCCCTGTCATATTTTCGCTCAATTCTATGTAAGCTACCCTAA 1158181 Query 50708 TGTT------------------TTATCCTGTCAATGTTATCAAAGATCAGCTG--ATATG 50747 || | || || ||| || ||||| || ||||| ||||| Sbjct 1158182 TGGTCCTACTAATAAAGGAGAATTGTCATGTGTATTATATCAGCGA--AGCTGCGATATG 1158239 Query 50748 GGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCAA 50807 |||||||| || || || || |||| ||||| || ||||||| | |||||||||| Sbjct 1158240 GGTTTAGGAGTACCATTTAATATAGCATCTTATGCACTATTAACAAAAATGATCGCTCAT 1158299 Query 50808 GCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATATTTACCTC 50867 | | || || | ||||| ||||||||||| ||||| || || ||||| || | Sbjct 1158300 GTTTGCAATTTGGATTGTGGAGATTTTATTCATACCTTAGGTGATGCCCATATATATTTA 1158359 Query 50868 GATCACGTCGATGCTTTAAAGGAGCAATTGA 50898 ||||| || || || || ||||| || |||| Sbjct 1158360 GATCATGTGGAAGCCTTGAAGGAACAGTTGA 1158390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075074923400