Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sporopachydermia_20quercuum_20[genbank_20GCA_5F001599295.1_202016-
03-01] 15 sequences; 16,411,463 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq4 152 1e-31
seq1 131 4e-25
>seq4
Length=1903616
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || || || |||||||| || ||||||
Sbjct 1735481 CAAATTTTCGTTAAGACCCTTACGGGTAAGACTATTACTCTCGAGGTTGAGTCTTCAGAC 1735422
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| |||||||| |||||||||||||| ||||| || || |||
Sbjct 1735421 ACCATTGACAATGTCAAGTCTAAGATTCAAGACAAAGAAGGAATTCCTCCAGATCAACAA 1735362
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || || ||| | ||||||||||| || ||| | || || ||| ||
Sbjct 1735361 CGTTTGATCTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACCCTTTCTGACTACAACATC 1735302
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132
||||| ||||| || || ||| | || ||
Sbjct 1735301 CAAAAGGAATCGACCCTCCATTTGGTCTT 1735273
>seq1
Length=2480924
Score = 131 bits (144), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||| || | || || ||||| ||||| | || || ||| ||||||
Sbjct 1873496 CAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCAGAC 1873555
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| ||||| ||||| || || || || ||||||
Sbjct 1873556 ACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAGCAA 1873615
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || ||||| || | ||||| ||| | ||||| | || || || |
Sbjct 1873616 AGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAATATT 1873675
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132
||||| ||||||||| | ||| | || ||
Sbjct 1873676 CAAAAGGAATCAACATTACATTTGGTGTT 1873704
Score = 131 bits (144), Expect = 4e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||| || | || || ||||| ||||| | || || ||| ||||||
Sbjct 1873724 CAAATTTTCGTGAAGACYTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCAGAC 1873783
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| ||||| ||||| || || || || ||||||
Sbjct 1873784 ACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAGCAA 1873843
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || ||||| || | ||||| ||| | ||||| | || || || |
Sbjct 1873844 AGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAATATT 1873903
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132
||||| ||||||||| | ||| | || ||
Sbjct 1873904 CAAAAGGAATCAACATTACATTTGGTGTT 1873932
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||| || | || || ||||| ||||| | || || ||| ||||||
Sbjct 1873952 CAAATTTTCGTGAAGACCTTGACTGGTAAAACCATCACATTAGAAGTTGAATCATCAGAC 1874011
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| ||||| ||||| || || || || ||||||
Sbjct 1874012 ACTATTGACAATGTCAAGAGTAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAGCAA 1874071
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| ||||| || ||||| || | ||||| ||| | ||||| | || || || |
Sbjct 1874072 AGACTCATCTTTGCTGGAAAGCAATTAGAAGACGGACGAACTCTATCGGACTACAATATT 1874131
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132
||||| ||||||||| | ||| | || ||
Sbjct 1874132 CAAAAGGAATCAACATTACATTTGGTGTT 1874160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730968657910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |