Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq17 315 8e-81 seq28 178 2e-39 >seq17 Length=239553 Score = 315 bits (348), Expect = 8e-81 Identities = 1371/2149 (64%), Gaps = 61/2149 (3%) Strand=Plus/Plus Query 52796 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 52855 |||| ||| | ||||| ||||| | ||| | ||||| | || || ||||| ||||| Sbjct 96092 TCCTGGTCAACCGTGAACTGAATAGCAGCAGCTGCGGCCTGAGTGCGCAGATAATACATA 96151 Query 52856 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACT 52914 || ||||| | ||| | ||| ||||| ||||||||||| || || ||| ||| | Sbjct 96152 CCAGTTTTCAAACCCTTAGACCAACCGTAGAAATGCATACTAGTGAGCTTGCCCATAGTT 96211 Query 52915 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 52974 || |||| || | ||||||| | ||||| || || ||||| | || | | || Sbjct 96212 GGGGCCTGC-ATGTAAATATTCAAACTCTGACTCTGGTCAATGAAAGGACCACGAGCGGC 96270 Query 52975 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 53034 |||||| | || || ||||| || |||||||| | || || || | |||||| Sbjct 96271 AGCCATATCAATAATGGTCTTCTGACTGATTTCCCAGACGGTCTTGTATAGATCCTTAAT 96330 Query 53035 ATCTTCTGGAA-----GGTTTGTATTCTGAATAGATCCACCATCTACCATAATCCTATTC 53089 ||| | |||| || ||| || |||||| |||||| | | || | |||||| Sbjct 96331 ATCCTGAGGAATCGAGGGGATGTCTTT--AATAGAACCACCACTTGCAATCAATCTATTC 96388 Query 53090 TTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACT 53149 || || ||||| ||||| | | || | | | || |||| |||||||| Sbjct 96389 TTCATATCATCGTTCCAGAGACCCATATCAACAAGGTCCTTGAGAAGATAGGGATTAACG 96448 Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 | ||| ||||| |||| ||| ||||| | || ||| | || ||| | || || | | Sbjct 96449 ATTTGGAATTCACCAGCCAAGACTCTTCTAGAGTAGAAGTTTGAGGTGAAAGGCTCGAAA 96508 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 | ||||| | || || ||||||| ||| || ||||| ||||||||||| || | | | Sbjct 96509 CATTCATTGTAGCCTAAGATTTGAGAAGTAGAAGCAGTAGGCATAGGTGCTACTAGAAGA 96568 Query 53270 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 53329 ||| | | ||| || | ||| | |||| | || ||||| | ||| | || Sbjct 96569 GAATTACGCAAACCATACTTCTTGAGATCGGCTTTCAAAGTATCCCAGTCCCACAAGTCA 96628 Query 53330 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGAT-----C 53384 | ||| ||| | |||| | | | || || | | | Sbjct 96629 GTAGGTGTAACGCCCCAAAGA-----TCGTAGGAAAGCTGACCTTCCGAAGCAGGACTGC 96683 Query 53385 CTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCAC 53444 || | || || || || || || || || ||| | || | || || | || Sbjct 96684 CTTCGTAAGTCTCATAAGGACCATCAACCTTAGCAATCTCGATAGAAGCTTCAACAGCTG 96743 Query 53445 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 53504 | | ||| ||||| ||||| |||| |||| || ||||| || || || ||||| | Sbjct 96744 CATGATATATGGTCTCGAATATCTGAATATTAAGCTCTTGGGCCTCTTGGGAGTCAAAAG 96803 Query 53505 GATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTA 53563 | | | | || | || || || ||||| || || | |||||| | | | || |||||| Sbjct 96804 GC-AGTCTGAGCATAAAGAAAGCATCTGCCAAGCCATTAACACCCAAAGCAATCGGTCTA 96862 Query 53564 TGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 53623 || | | | || || ||| ||||| | ||| || ||||| |||| ||||||| | Sbjct 96863 TGACGCATGTTGGAACGACGAGCCTCTGGGACAGGGTAGTAATTCTTATCGATAATTTGA 96922 Query 53624 TTGAGGTTTCTGACAATTACTTTGACCACATCCTTCA---GTTTGAGAAAATCAA----- 53675 || | ||| ||| |||||| || || | || | |||| | || | Sbjct 96923 TTCAAGTTATAAGTAATAGATTTGACAACCTCATGCAAATGCTTGAAATCATAGAGAACA 96982 Query 53676 --ATTGTCCAT---CTATTACAAA--CATGTTCAATGCAATAGATGCCAGATTACAAACG 53728 || ||| | || ||||||| || | | |||| || ||||||||||| || Sbjct 96983 CCATCATCCTTTGTCT-TTACAAAGGCAGGGAGA--GCAACTGAAGCCAGATTACATACA 97039 Query 53729 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATG 53788 || || | || | | || | | || ||| ||| | |||| || |||||| Sbjct 97040 GCAGTTTCCTCAGGACTAGAGTACTCAACGATTTCACAGCACAAATTAGAACTCTTGATA 97099 Query 53789 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGC 53848 || || | ||| | ||||||||||| |||| | |||||||||||| ||||| || Sbjct 97100 GTACCAAGATTACGCTGATTACTCTTGCGGTTAGCCTGATCCTTATAAAGCATGAAAGGA 97159 Query 53849 GTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATA 53908 |||| || ||| | || | ||| | ||| || | ||| | |||| || || || Sbjct 97160 TTACCTGTCTCAGTTTGAGCTTCCAAAATGGCGTACCATAGCTTCTGAGCTTTGATGGTA 97219 Query 53909 GATTTGTATCTCTTTTCTCTTTCGT--ATA--GTGTATACAATCGTTCAAACTCGTCTCC 53964 | |||| | | | ||| ||| |||| || | ||| || || || || Sbjct 97220 C----GACGACCTTTACCCATACGTTCATAACGTGTGTAAAGCTCTTCGAATTCATCACC 97275 Query 53965 CCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 54024 |||||| | | ||||| ||||| | ||||||||||| | ||||||||| ||| Sbjct 97276 ATAAACATCAGCAAGACCAGGGCATTCGTTGGGACACATCAATGTCCACTCTCCATCAGA 97335 Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084 ||| |||| ||||| || | ||||||||||||||||| | ||| ||||| | || | Sbjct 97336 CTTAACTCTCTTCATGAATAAGTCAGGAATCCAAAGAGCCAAAAACAGATCACGGGCACG 97395 Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144 ||| || || || || ||||| |||||||| ||| | | || |||| |||||| Sbjct 97396 GACTTCTTCCTTACCAGTGTTCTTACGAAGATCGATGAAGTCAAAAACATCATCATGCCA 97455 Query 54145 CGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 54204 ||||| | || || | | | | || || |||||||| || |||||||| | || | Sbjct 97456 GGGTTCAAGATAAATAGCGAAAGCACCTGGACGTTTGTTGCCACCCTGATCAACATAACG 97515 Query 54205 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCC 54264 ||| |||||||| | || | | |||||||| |||||| ||||||| ||| || || || Sbjct 97516 AGCAGTGTTATTGAAGACACGAAGCATTGGAAGAATACCGTTGGATGTACCGTTAGTACC 97575 Query 54265 GGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCAT 54324 || ||| || ||| ||||||| ||||| || ||||| || || || || Sbjct 97576 GGCGATGTAAGAACCAGTGGCACGGATATTGTGAACATTAAGACCAATACCACCAGCAGA 97635 Query 54325 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 54384 |||||| || | || || ||||| |||||||| ||||| || ||| || || | Sbjct 97636 TTTAGAAATAAGAGCACAAGATTTTAGGGTATCATAAATGCCATCGATAGAGTCGTCTTT 97695 Query 54385 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 54444 |||| || || ||||| | |||||| | | ||| || ||||| | || || Sbjct 97696 CATGCAAACAAGGAAACACGAACTCATTTGAGGTCTGGGAGTACCGGCATTGTACAAAGT 97755 Query 54445 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGAT-AGCTGAGT 54503 ||||||||||| || || | || | || | | | ||| || ||||| | || || Sbjct 97756 GGGAGAAGCGTGGGTGAAGTACTTGTTGGACATCAAGTCGTATGTTTCGATGACCTTAG- 97814 Query 54504 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTC-- 54561 || | | ||| || || | || || | ||| | ||| ||||| || | ||| Sbjct 97815 GGATGTTAAAACCATGGATACCAATAGCAACTCTCATGATCATATGCTGTGGACGTTCGT 97874 Query 54562 -AACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 54620 ||| | || | |||||||||||| || | ||| ||||| ||||| || | Sbjct 97875 GAACAA---CACCATTAAGTTTCAGCAAGTAAGAGCGCTGCAATGTTTTGAAACCGAAGT 97931 Query 54621 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGT 54680 | |||||| || || || | |||| || | | | || || | | || || | Sbjct 97932 AATTGTATTTGAAATCACGCTGGTAATCGATGGCAGCATCGATTTCAGCACCATGCTTCT 97991 Query 54681 TAACTACATCCATGGTAATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 54738 | || || | ||| | | ||| ||||| || || || || | ||| | || || Sbjct 97992 TGACGAC-TTCAT-GAACCTCTTCAGAAATCATAGGTGAGTGACGATCGTTTCTGGGGTT 98049 Query 54739 GACATAGTTAAATAAATCCTTCATCACTTCACT-AAATAGtttttttGTTTCTTTGTGTA 54797 |||||| | ||| ||||| | || | ||| ||| || | ||| || | ||||| | Sbjct 98050 AACATAGGTGTATAGATCCTCTACAACCTGACTGAAAGAG-TCTTTGGTCTGCTTGTGAA 98108 Query 54798 GATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG 54857 | || || | || || | || || |||| ||||| || |||||||| || || | Sbjct 98109 GGTTAGAAATAGCAATACGTGCAGCCAGAAGAGCATAGTCAGGATGTTGAGTGGTCATAC 98168 Query 54858 TGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCC 54906 | || || |||| |||| || |||| | ||||| || || || || Sbjct 98169 TAGCAGCAGTTTCAGCTGCAAGGTTGTCGAGCTCTACAGTAGTGACACC 98217 >seq28 Length=170371 Score = 178 bits (196), Expect = 2e-39 Identities = 490/746 (66%), Gaps = 19/746 (3%) Strand=Plus/Plus Query 23825 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 23884 || ||||||||| || |||||||| || ||||| || ||||| ||||| || || Sbjct 13700 TTTAGACATAACACCGGCCTTTTGGTAGTCTGAAACACGCTTCTCGAAGAAATTGGTCTT 13759 Query 23885 ACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA--TTCTT 23942 ||| | ||||| ||||| |||||||||||| | ||||||| ||||| || | || || Sbjct 13760 ACCAGCCAATGAAATATTCTCCATGAAATCGAAAGGATTGGCGACATTGTACACCTTGTT 13819 Query 23943 TTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATT 24002 | | ||||| | | || |||||| || |||||||| | ||| ||||| | Sbjct 13820 CTGA--CCCAAAGCTACGAGCAGTCTATCAGCCACAAACTCGACATACTGGTTCATTAAG 13877 Query 24003 TCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATA 24062 || |||||| || | || | || || | ||| | | | | || || |||||| Sbjct 13878 TCGGCATTCATACCGAGTAGACTGACAGGCAAAGCATCTCTGAAGTACTCCTGCTCAATA 13937 Query 24063 GAGACCGCGTCTGTTATAATA-GATCTT-----ACTGTTTCTTCACTCGGTGGATACAAT 24116 ||| || || || | |||| | ||| | | | || ||| | | Sbjct 13938 TCGACTGCTTCAGTAAGAATACGTTCTATAACAAAGGGTGCT------GGTCTGTTCTCC 13991 Query 24117 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 24176 ||||| | | | | ||| ||||||||| || ||||||||||| | | ||| || Sbjct 13992 AAATGGCTGTAAAGGAGACAAGCGAAATCGGTATGAAGACCCTCGTCACGAGAAATCAAC 14051 Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236 ||||| || || | || ||||| |||||||| ||||| ||||| || || | ||| Sbjct 14052 TCGTTACTGAAGGTCAAACCCGGCATAAGGCCACGTTTTTTGAGCCAGAAAATAGCAGCA 14111 Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296 || ||||| || ||||||| || || || || || || |||| |||| || | || Sbjct 14112 AAGGATCCTGAGAAGAAAACACCCTCAACAGCTGCGAATGCAACTAGTCGCTCAGCGAAA 14171 Query 24297 CCGGC--GCT-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 24353 | || || |||| ||||| ||||||| | ||||||||| | | ||| Sbjct 14172 CTAGCTTCCTCGTCAGTAATCCAGCGAAGAGCCCACTTGGCCTTCTTCTGAATGGCAGGA 14231 Query 24354 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 24413 || || || |||| ||| || | | ||| ||| | || || || || || ||| Sbjct 14232 ATCGTGAAAATGGCATCAAAAAGGAACTGGGATTCCTTAGTTTCCTTGACGTAAGTGTCA 14291 Query 24414 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 24473 || | |||||| ||||| || || |||||||| || || || || |||||||| || Sbjct 14292 ATAAGAAGACTGTACATCTCAGAGTGAATGTTCTCCATCATAATCTGGAATCCGTAAAAG 14351 Query 24474 CATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACT 24533 || | ||||| | || || || ||| || | | || || |||||||| Sbjct 14352 CACTTGGCCTCAGAGATACCAACGTCAGTACTGAACCTGGAAACCAAGTTCTCATTCACA 14411 Query 24534 ATTCCGTCACTGGCTGCAAAAAACGC 24559 || |||||||| || ||||||||||| Sbjct 14412 ATACCGTCACTAGCGGCAAAAAACGC 14437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720776211280