Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Starmerella_20bacillaris_20[genbank_20GCA_5F002024125.1_202017-03- 09] 111 sequences; 9,274,942 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq28 149 6e-31 seq29 114 1e-20 seq58 100 3e-16 seq47 91.5 2e-13 >seq28 Length=170371 Score = 149 bits (164), Expect = 6e-31 Identities = 374/561 (67%), Gaps = 13/561 (2%) Strand=Plus/Minus Query 116657 GCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGG 116716 || || || || |||||||| ||| ||||| || ||| || |||| | |||||| Sbjct 14545 GCTGAAGCTTCTTTCTGGACAACCGAAGAGGTTGATCTGGCCCAGGATATTCAGGACTGG 14486 Query 116717 GAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773 || | | |||| ||| |||| || | || || | || || || ||||| ||| Sbjct 14485 GAACTTAGGCTGAATGACGACGAACGTTACTTTATTTCACGAGTTCTAGCGTTTTTTGCC 14426 Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTG 116833 || || ||||| || || || ||||| |||| | ||| | || || | Sbjct 14425 GCTAGTGACGGTATTGTGAATGAGAACTTGGTTTCCAGGTTCAGTACTGACGTTGGTATC 14366 Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATG 116893 | ||||| |||||| ||||| || ||||| ||||||||| | ||||| || ||| Sbjct 14365 TCTGAGGCCAAGTGCTTTTACGGATTCCAGATTATGATGGAGAACATTCACTCTGAGATG 14306 Query 116894 TATTCGACCCTCATCGACACGTACGT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTG 116950 || || || ||||| ||||| | || ||| || ||| ||| || Sbjct 14305 TACAGTCTTCTTATTGACACTTACGTCAAGGAAACTAAGGAATCCCAGTTCCTTTT--TG 14248 Query 116951 AACGCCATCGAGACGATGCCGTGCG--TCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGA 117008 | ||||| ||||| || ||| ||| | |||||||| ||||||| || ||||||| Sbjct 14247 AT-GCCATTTTCACGATTCC-TGCCATTCAGA-AGAAGGCCAAGTGGGCTCTTCGCTGGA 14191 Query 117009 TCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCG 117068 | | | | || || |||| ||||| || || || ||||| || || ||||| | Sbjct 14190 TTACTGACGAGGAAGCTAGTTTCGCTGAGCGACTAGTTGCATTCGCAGCTGTTGAGGGTG 14131 Query 117069 TCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCG 117128 | ||||| || || || || || || || |||||||| ||||| ||||| ||||| | Sbjct 14130 TTTTCTTCTCAGGATCCTTTGCTGCTATTTTCTGGCTCAAAAAACGTGGCCTTATGCCGG 14071 Query 117129 GCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCT 117188 | |||| ||||| |||||| | || || | ||||||||||| ||| ||| || || | Sbjct 14070 GTTTGACCTTCAGTAACGAGTTGATTTCTCGTGACGAGGGTCTTCATACCGATTTCGCTT 14011 Query 117189 GTTTGCTGTTCAAGCATTTGG 117209 || | || | || ||||||| Sbjct 14010 GTCTCCTTTACAGCCATTTGG 13990 >seq29 Length=154453 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||| | || || || || || || || |||||| |||| || ||| || Sbjct 41872 AAAATGCAGATTTTCATCAAGACTCTAACAGGAAAGACTATCACCCTCGAGGTTGAATCC 41813 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | ||| |||||| || || || || || || | ||| Sbjct 41812 AATGACACCATTGAGGCCGTAAAGAGCAAAATTAGTGATAAGGAAGGTATTCCTCCTGAC 41753 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || ||||| || |||| ||| ||||||||||| || || | ||||||||| |||||| Sbjct 41752 CAACAACGTCTTATCTTCGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCTGACTAC 41693 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| ||| |||| || || Sbjct 41692 AACATCCAGAAAGAGTCCACTCTTCA 41667 >seq58 Length=350062 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||| |||| ||| | ||||| || || || ||| |||| || || | Sbjct 20756 AAAATGCAGATTTTCATAAAGACGTTGACGGGAAAGACTATTACCCTCGAGGTTGAGTCT 20815 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||| || || |||||| || || || || | ||| Sbjct 20816 AATGACACCATCGAGGCTGTCAAAAGCAAGATCAGCGACAAGGAAGGTATTCCTCCTGAC 20875 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || | |||| ||| || |||||||| || || | |||||||| |||||| Sbjct 20876 CAGCAGCGTTTGATCTTCGCTGGTAAACAGCTCGAGGATGGCCGCACCCTTTCTGACTAC 20935 Query 40867 AACATCCAGAAGGAGGCCAC 40886 ||||||||||||||| |||| Sbjct 20936 AACATCCAGAAGGAGTCCAC 20955 >seq47 Length=387992 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 40782 CGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGA 40841 |||||| || || || || | |||||||| || || |||| ||| ||||| ||||| || Sbjct 346329 CGACAAGGAAGGTATTCCTCCTGACCAGCAGCGTCTTATCTTCGCTGGCAAGCAGCTTGA 346270 Query 40842 CGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 |||| ||||| || ||| || ||||||||||||||| |||| |||||| | || | Sbjct 346269 GGACGGCCGCACTCTTTCCGAGTATAACATCCAGAAGGAGTCCACTCTGCATTTGGTTCT 346210 Query 40902 GCGCTTGAGGGGCGG 40916 || ||| | || || Sbjct 346209 CCGTTTGCGTGGTGG 346195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218485133360